Gene Nmar_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0583 
Symbol 
ID5774063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp519284 
End bp520009 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content37% 
IMG OID641316217 
Producthypothetical protein 
Protein accessionYP_001581917 
Protein GI161528091 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID[TIGR00161] conserved hypothetical protein TIGR00161 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAAAAG AATTTCCAGA AGCAGAAGTT TTTGAAATAA AGAAAAGAGA GTTAAAGAGT 
CCTGTAATTT TTGCAGGTTT TGTTGGTGCA GGTTTAGTGG GACCTGTTGC AATTAATCAC
ATAATTGAGA AATTAGAAAT GGATGAAATT GCAGTTATGA GATCAAAACA TCTTCCACCA
TCAACAGTAT TTATGAGAGG CAGATTACGT CACCCATTTA GATTCTATGC AAACAAAGAA
GGTACAATTT GTGCAATTAT TTGCGAAATT ACACTAAGAA TGGAAGGTCT GTATTCGTTG
GTTGCATCAA TTTTAGATTG GGCCGCGGCA AAGGGATCAA AAGAAATTGT TATTTTAGAC
GGAGTTGCAA GTACGGAACA CGACGATAAA GCGTATTGTG CTGCTGAAGA AGATTTGGTA
AGAACCATGG CCGACAAAGA CATCAGTATG ATTCCACAAG GATTCATCAC AGGAATTCCA
GGAGGAATAC TAAACGAATG TTTGGTAAGA GAAATTCAAG GATTGACATT GTTGGCAAAG
GCAAGTAGAG ATACCACAGA TTCTGGGGCT GCAGCCACAT TAATTGAGGC TTTAAATCGA
TTCTATGATA CAGACATAGA CACAACGGAT CTGCAAGAAG AAAAAGATAG AATTCATTCA
GAGTTTAGTG AGTTGTCTCA AAAATATGTA GAACATAGAG AAGAGATAGC TGGAATGTAC
ATGTGA
 
Protein sequence
MPKEFPEAEV FEIKKRELKS PVIFAGFVGA GLVGPVAINH IIEKLEMDEI AVMRSKHLPP 
STVFMRGRLR HPFRFYANKE GTICAIICEI TLRMEGLYSL VASILDWAAA KGSKEIVILD
GVASTEHDDK AYCAAEEDLV RTMADKDISM IPQGFITGIP GGILNECLVR EIQGLTLLAK
ASRDTTDSGA AATLIEALNR FYDTDIDTTD LQEEKDRIHS EFSELSQKYV EHREEIAGMY
M