Gene Nmar_0570 details

Gene Information

• Locus tag: Nmar_0570
• ID: 5772956
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 507793
• End bp: 508344
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641316204
• Product: DNA-3-methyladenine glycosylase I
• Protein accession: YP_001581904
• Protein GI: 161528078
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2818] 3-methyladenine DNA glycosylase
• TIGRFAM ID: [TIGR00624] DNA-3-methyladenine glycosylase I

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 0.890211
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGCGAT GCAAATGGGC TACAGAGGAG CCAAACATAA CCTATCATGA TAAAGAATGG 
GGAAGACCTC AACATAATGA TCAAAAATTA TTTGAATTTT TAGTCCTGGA GGGTGCTCAG 
GCTGGTCTTT CATGGGTAAC TATTCTCAAG CGTCGAAATG GCTACAAAAA AGCATTTTCT 
GATTTTGATG TCCTCAAAGT TTCAAAATAT TCTGAAAAAC GAATATTGAA ATTATTGCAA 
GACGAATCCA TAATTCGAAA CAAACTCAAA ATCAATTCTG CAGTAAATAA TGCAAAACAA 
TTTCTCAAAA TCCAAGAAGA ATTTGGTTCT TTTGACAAAT ATCTCTGGAG TTTTGTAAAT 
GGAAAACCAA TCAAAAATAA ATTCAAAAAA TTATCTGATT TACCTGCATC AACTGAAATA 
TCTGAAAAGC TTAGCAAAGA CCTCAAAAAA CATGGATTTA GTTTTGTTGG ACCTACAATA 
TGTTATGCAT TAATGCAGGC AATAGGAATG GTCAATGATC ATACAACTGA GTGTTTTTTG 
CATGGAAAAT GA 

 

Protein sequence

MKRCKWATEE PNITYHDKEW GRPQHNDQKL FEFLVLEGAQ AGLSWVTILK RRNGYKKAFS 
DFDVLKVSKY SEKRILKLLQ DESIIRNKLK INSAVNNAKQ FLKIQEEFGS FDKYLWSFVN 
GKPIKNKFKK LSDLPASTEI SEKLSKDLKK HGFSFVGPTI CYALMQAIGM VNDHTTECFL 
HGK