| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0561 |
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| Symbol | |
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| ID | 5773395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 502286 |
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| End bp | 502999 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641316194 |
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| Product | major intrinsic protein |
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| Protein accession | YP_001581895 |
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| Protein GI | 161528069 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.490316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAGTC CTAGAAATTG GCTTGCAGAA GCAATTGCCA CATTTGCATT GGTCTTCTTT
GGTCCTTTAT CTGTGATTCT TGCAGCAGCG GTCTTCGGTG ATGGATTAAC TATTGAAGGA
ATTATTATGA TATCTTTGGG CCACGGTGCT GCAATTGCAT TTATGGTATA TGCATTTGGA
CATGTTTCTG GTGCTCACAT TAATCCTGCA GTGACTATTC CAATGATGAT AACAAAAAAG
ATTGGAATTG CAGACGGAAT TGGATACATT GTATTTCAAA TAATTGGTGC AATCATTGCA
ACTGGTACTC TAATTGCTTT GTTCCCTGAG ATTGGAAAAC CTGTTTTCTG GGGTGCACAT
GGCGGACCAA GTGAATTACT TGGTGGCAGC TTGATGTCTG GATTAGTACT TGAAATGATT
ATGACCTTCT TCTTAGTTGT TGTAATCTTT ATGACTGCCG TTCACAAGAA AGCTCCAAAG
AGTGTTTATG GCGCTGTAAT TGGTGGCATG GTGTTCTTAC TTCACTTAGT AGGTGTCCCA
TTAACTGGTG CATCCATGAA CCCAGCAAGA TCTTTGTCTC CAACATTACT TTCTGGCGAT
GCCGGATTAT GGGAAGTACA ATGGCTCTAT TGGGTAGGAC CAATCGTCGG TGGTATCATT
GCTGGTTTGA TAATGAACTA CATCTATGTC AATAAAGCCG AAAAAGAAGC ATAA
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| Protein sequence | MVSPRNWLAE AIATFALVFF GPLSVILAAA VFGDGLTIEG IIMISLGHGA AIAFMVYAFG
HVSGAHINPA VTIPMMITKK IGIADGIGYI VFQIIGAIIA TGTLIALFPE IGKPVFWGAH
GGPSELLGGS LMSGLVLEMI MTFFLVVVIF MTAVHKKAPK SVYGAVIGGM VFLLHLVGVP
LTGASMNPAR SLSPTLLSGD AGLWEVQWLY WVGPIVGGII AGLIMNYIYV NKAEKEA
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