| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0555 |
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| Symbol | |
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| ID | 5773675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 495049 |
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| End bp | 496491 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316188 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001581889 |
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| Protein GI | 161528063 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.431346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAATAG AAGACATTCA AGAGTTTATC TCAGAACTTG AAAAAAATGG AGAATTAAAG
AGAGTCAAGA CACAAGTGGA CTCTAATTTA GAAATTGCAG AAATCATGAG AAGAGAGATG
TATTCAAACG GACCTGCAAT TCTTTTTGAA GATGTAAAAG ATTACGATAT GCCAGTTTTA
GGAAATGCGT TTGGTTCTAT GAAAAGATTA GAGATAGGAC TTGAAATGAC AGACTTTACT
GAAATCGGAC AACGCATTGC AGATATGACA AAGATGGATG TGCCATCAGG TTTGTTAAAC
AAAATAAAAA AACTTCCAGA ACTCTCAAAG ATGACTGCAT CGTTTCCTAA ATCAGAAGTT
AGTGGACCAG TAACTGAAAC TACATCTACT GATGCATCAT TTGATGATTT GCCAATTTTG
AAATCTTGGC CAAATGATGC AGGACGATTC ATCACATTAG GACTGGTTGC AACAAAGCAT
CCAGAAACAG GAGTTAGGAA TCTTGGAGTA TATAGAATGC AGATTGTAGA CAAGACACAT
GCATTAATGC ATTGGCAAAA ACACAAGAGA GGAGCTCATC ACGGAGATAT TTCAAAAGAC
AAGGGAGAGA AAATTCCAAC TGCAATAATT ATTGGTGGAG AACCTGCAAC AGTATTTTCA
TCAATTGCTC CAGTGCCAGA AGGACTAGAC AAATACTTGT TTGCAGGAAT TACACGAAAA
GAAGGTATCA AAACTGTAAA ATGCAAAACA ATTGATTTGG ATGTTCCAGC AAATGCAGAA
ATTGTTTTGG AAGGATACGT AGATCCAGCA GACATCAGAG ATGAAGGACC ATTTGGAGAT
CATACAGGAT ACTATACACC AGTTGAACCA TATCCAACTT TCACACTAAC AGGAATTATG
AGAAGAAAGA ATCCAATCTA TGTTACAACA GTAGTTGGAA AACCAATTCT AGAGGATGCA
TATATTGGAA AAGTAATCGA ACGCTCATTC TTACCACTAA TTCAGATGTT CCATCCAGAA
GTAGTTGATT TCAGTATGCC AGCTGCTGGT TGGTTCCAAG GATTTGCAAT AATTTCAATC
AAAAAGAGAT ACCCAGGTCA AGCAAAAAAA GTGATGATGG GATTATGGGG AATGGGGCAG
TTATCACTAA CAAAGATGTT TGTAGTAGTT GATGAAGACA TCAATGTTCA TGACATCAAT
GATGTGATTT GGGCAATTAC AACAAGAGCA GATGCAGCAA GAGACACTAC AATAATCAAT
AATGCTCCAA CAGATACACT GGATCCAGCA TCACCACTTG TCAATCTAGG TTCTAAGATG
GGAATTGATG CAACACAGAA AACAAAAGAA GAAGGATATG AAAGAGAGAT TCAACAACAA
GTAAAAGTTG ATGAAGAAAC AAAAAATCTA GTTGATTCTA AATGGTCTGA TTATGGACTA
TGA
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| Protein sequence | MPIEDIQEFI SELEKNGELK RVKTQVDSNL EIAEIMRREM YSNGPAILFE DVKDYDMPVL
GNAFGSMKRL EIGLEMTDFT EIGQRIADMT KMDVPSGLLN KIKKLPELSK MTASFPKSEV
SGPVTETTST DASFDDLPIL KSWPNDAGRF ITLGLVATKH PETGVRNLGV YRMQIVDKTH
ALMHWQKHKR GAHHGDISKD KGEKIPTAII IGGEPATVFS SIAPVPEGLD KYLFAGITRK
EGIKTVKCKT IDLDVPANAE IVLEGYVDPA DIRDEGPFGD HTGYYTPVEP YPTFTLTGIM
RRKNPIYVTT VVGKPILEDA YIGKVIERSF LPLIQMFHPE VVDFSMPAAG WFQGFAIISI
KKRYPGQAKK VMMGLWGMGQ LSLTKMFVVV DEDINVHDIN DVIWAITTRA DAARDTTIIN
NAPTDTLDPA SPLVNLGSKM GIDATQKTKE EGYEREIQQQ VKVDEETKNL VDSKWSDYGL
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