| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0554 |
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| Symbol | |
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| ID | 5772944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 493936 |
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| End bp | 495054 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641316187 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001581888 |
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| Protein GI | 161528062 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.420102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTCAGA CAACAGAACA ATTAGAAAAA AGTGACATTA AAGATATTTT AGAAAATTCT
CTTAATGGAA AAAGACCTGG TCCTGAAGAC TGTATGAGAT TGTTGGAGTC TGATGATGTT
CATCTAATGG GACTTGTATC TGGCCATTTG ACAAGAAAGC AATTTGGAAA GAAAGCATCT
TTTGTCAATA ATATTATTTT GAATTACACC AATGTCTGTA TTACTGACTG TAAGTTTTGT
GCATTTTACA GATCACCTGG TGCTGATGAT TCTTACACTT TAACTTTGGA ACAAATTGAA
TCACGTGTAA AAACCGCATG GGACATGTTT AAGATCCGAC AGGTCTTGAT TCAAGGTGGT
CATAACCCAA ATCTGAAAAT TGAATACTAT GAAGATGCAT TTAGAATGAT TAGGGAGAAA
TTCCCTAAAG TTGGTGTACA TGGATTGTCA ACATCAGAAA TTGACATGAT TGCAAGAGTT
GAAAAATCCT CAACAAAAGA AATTTTATCA CGACTCAAAG ACGCAGGTTT ACAATCAATG
CCTGGTGCAG GAGCTGAAAT CTTGACTGAC TCTGTTAAAG AAATCATTAG TCCAAAGAAA
ATCTCTAGTG ATGCTTGGAT TAGAATCATG AATGAAGCTC ATTCACTTGG AATTCCATCT
TCTGCAACAA TGATGTACGG ACATGTGGAA AACAAAAATG ACATTGTTGA ACACTTTTTC
AAACTTGTAA AATTACAAGA AAAAACCAAA GGATTCATGG CATTTATCCC TTGGAACTTT
GAGCCAAACA ATACTTTGAT GCATGAAGAG GGATTAGTTG AATATGGTAC TGGTGGAATT
CAACTCTTGA AAATGATTGC AATCTCTAGA TTAATCTTTG ATGGACTTAT ACCTCACATA
CAATCCTCAT GGCTGACAAA TGGTATCGGT ATGGCACAAC TAGCTTTACA GTATGGCGCT
GATGACTTTG GTGGTACTCT AATTGGAGAA GAAGTAGTTT CATGTACTGG CGCACGCTCA
ACTGAACTTA CTGATAAAAT AATCATGGAT GCAATTCATC AAATTGGTTA TTCAGTTGAA
GAGAGAGATA ATTTCTATAA TCCTATTTCT GTATCATAG
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| Protein sequence | MSQTTEQLEK SDIKDILENS LNGKRPGPED CMRLLESDDV HLMGLVSGHL TRKQFGKKAS
FVNNIILNYT NVCITDCKFC AFYRSPGADD SYTLTLEQIE SRVKTAWDMF KIRQVLIQGG
HNPNLKIEYY EDAFRMIREK FPKVGVHGLS TSEIDMIARV EKSSTKEILS RLKDAGLQSM
PGAGAEILTD SVKEIISPKK ISSDAWIRIM NEAHSLGIPS SATMMYGHVE NKNDIVEHFF
KLVKLQEKTK GFMAFIPWNF EPNNTLMHEE GLVEYGTGGI QLLKMIAISR LIFDGLIPHI
QSSWLTNGIG MAQLALQYGA DDFGGTLIGE EVVSCTGARS TELTDKIIMD AIHQIGYSVE
ERDNFYNPIS VS
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