| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0548 |
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| Symbol | |
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| ID | 5773778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 488310 |
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| End bp | 489578 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641316181 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001581882 |
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| Protein GI | 161528056 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGTA AAGTAGAAAA ATCAAAAATT TCAGGACAAA TTGTTTGTCC TTCAAACAAG
AGCTATACTC ATAGAGCAAT ATTTCTTGCA TCACTTGCAG GAAATGGCAG CAAGGTGGAA
AATGTACTAT TATCAGCAGA CACCATGGCA ACAGTTGAAG CATGTAAAAA ATTTGGAGCA
TCCATTGAGA TTGAAAATTC ATCAATAATT GTAAAAAATC CCATAAAATT TGACAAAATC
GTGCCTGAAA TCAATACTGA AAATTCAGGA ACCACAATAA GAATAGCCTC AGGAATCGCT
AGTTTGTTTT CAGAAGAGAT TACGTTAACA GGGGATGAGA GTCTTCAAAA AAGACCCATG
CAGCCTCTCT TAGACGCACT ATCAAGTATT GGAGCACAAT GCCAATCAAC TGATGGAAAA
CCACCAATCA AAATTACAGG AAAGATTTCA GGTGGAGATG TTACAATTCC AGGAAACTTT
TCTAGTCAAT TCATTTCTGC ATTATTAATC AGTGCGCCAT TGACTGAAAA GGGAATCAAT
CTTTCAATTA AAGATAATCT AGTATCAAAA CCATATCTTG ATGCCACCAT TGCAACTATG
AGAAAGTTTG GAGTAAGCGT ACAAACATTA ATTCCATATA AAAGATACAA CATTTCACCT
CAAGTTTACA ATGCGGCAAC ATTTACAGTT CCAATTGATT TTTCTAGTCT TGCATTATTG
TTATCAGCAG CAGTACTTAA TGGAGATGAA ACTGTAATCA AAGGAAATAT TGGAAATTTA
CCACAAGGGG ATGAAGTCTT TATTGACATA CTAGAGCAAT TAGGAGTAAC TGTAAATATT
GGAGAAGATG AAATTAAAAT CAAATCTCCT GAAAAACTAA AAGGAGGAAG ATTTGATTTG
AGTAATTCTC CAGATCTTTT ACCACCACTA ACAATACTTG CATTAAATTC AGAAAATCCA
ATTGAGATTG TAAATGTAAA ACATGCAAGA CTAAAAGAGA CAGACAGAAT TGCAATAACA
TCAAGAGAGT TAGTTAAACT TGGAATTAAA GTTCAAGAAA ATGAAGATGG TTTGATTTTA
GAATCAACAG AGAATCTTAC CGGTGCAGAA TTAAATTCTG AAAATGACCA CAGACTATTC
ATGGCGTTTT GTATTGCAGG AATGTATGTT GGAAATTGTG TTGTAACAGA TCCTGAATCA
GTCCAAGTTT CTTATCCAGA TTTCGTCGAA GAGATGAATA GGATTGGAGC AAGAATTCAA
CCAGAATAA
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| Protein sequence | MKCKVEKSKI SGQIVCPSNK SYTHRAIFLA SLAGNGSKVE NVLLSADTMA TVEACKKFGA
SIEIENSSII VKNPIKFDKI VPEINTENSG TTIRIASGIA SLFSEEITLT GDESLQKRPM
QPLLDALSSI GAQCQSTDGK PPIKITGKIS GGDVTIPGNF SSQFISALLI SAPLTEKGIN
LSIKDNLVSK PYLDATIATM RKFGVSVQTL IPYKRYNISP QVYNAATFTV PIDFSSLALL
LSAAVLNGDE TVIKGNIGNL PQGDEVFIDI LEQLGVTVNI GEDEIKIKSP EKLKGGRFDL
SNSPDLLPPL TILALNSENP IEIVNVKHAR LKETDRIAIT SRELVKLGIK VQENEDGLIL
ESTENLTGAE LNSENDHRLF MAFCIAGMYV GNCVVTDPES VQVSYPDFVE EMNRIGARIQ
PE
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