Gene Nmar_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0544 
Symbol 
ID5773274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp484253 
End bp484657 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content30% 
IMG OID641316177 
ProductNUDIX hydrolase 
Protein accessionYP_001581878 
Protein GI161528052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.788518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCAA CAAAGATAGT TACTTCTTTT ATCAAAGATA ATGAAAAATT ATTAATTCTA 
AAACGAAGTG CTGACGTCAA AACCATGAAA GGTTTGTGGG CAGGCATAAG CGGAATTATA
GAAAAAAATG AAGAGCCACT CAAAAGAGCA AAAATCGAGA TATTTGAAGA GGTTGGAATT
ACAGAAGATG AAATAACTTT ACTAAAATCA GCTGAAGAGA TGAGAGTTAA TTCACCACAA
TATCAAAATC ATGAATGGAA GATTTTTCCA TTTTTATTTG AAGCAAAAAA CCCAACCATC
AAACTCAATT GGGAAAATTC TGATTTTAAA TGGATTAATG TTGAGGAATT AAAAAATTAT
GAAACAGTTC CTAGTCTTGA CAAAGTATTA TTCAATTTGT TGTAG
 
Protein sequence
MRSTKIVTSF IKDNEKLLIL KRSADVKTMK GLWAGISGII EKNEEPLKRA KIEIFEEVGI 
TEDEITLLKS AEEMRVNSPQ YQNHEWKIFP FLFEAKNPTI KLNWENSDFK WINVEELKNY
ETVPSLDKVL FNLL