| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0543 |
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| Symbol | |
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| ID | 5773115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 482942 |
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| End bp | 484270 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316176 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001581877 |
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| Protein GI | 161528051 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.762964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTC AAATGACTGC AGCAAGACGC GGTGTTGCAA CTGATGAGAT GAAACAAGTT
GCAAAAGATG AGGATGTTAC TCTTGATTGG TTAATCCCAA AAATTGCAAA GGGCTCTATA
ATTATTCCAA GTAATAACTG TAGACCTCAA AAAATTCATA ATGTTGGAAT TGGTAAGGGT
TTGAAAACCA AAGTAAACGT AAACATTGGA ACTTCTACAT TAAACGTAAA TCTAGAAGAA
GAGATTGAAA AAGCAAAAGT TGCTGTAAAA TATCATGCAG ATACTATGAT GGATCTTAGT
GATGGCGGTG ATGTAAAACA CATAAGAAAA ACTCTGTTAG AAACTGCTCC AATTACTTTT
GGCACTGTTC CAATTTATGA AGCATACAAC TATGGTGTTG AAGTACACAA AAACCCATTG
AATTTAACTG AAGATGATTA TCTAAACGCA TTTGAAAACA ATGCTAAAGA TGGCGTTGAT
TATACTACAA TTCACTGTGG AATTACAAAA GACATTGCAA AAAGAATTCT AAAGGTTCAG
AGATATGGTG GTGTTGTCAG TAAAGGAGGC ACCATAACTG CCGCATGGAT GTTAAAACAT
GACAAAGAAA ATCCCTACTT GACTCATTAT GATTATCTTG TGGAGATGGC AAAAAAATAT
GATGTGACTT TTAGCCTTGG AGATGCTCTT AGGCCAGGCT CAATTTTGGA CTCTCATGAT
GAATTACAAG TTCAAGAAAT GATTAACATC TCTCAGCTAA CAAAACGTGC ACATGAACAA
GATGTTCAAG TGATGGTTGA AGGTCCAGGC CATGTACCAT TAAACGAAGT TGCAGCAAAT
GTTAGACTGG CAAAGTCTTT GATTGGAGAT GTTCCATATT ATGTTCTAGG ACCTTTAGTA
ACAGATGTTG CATCTGGACA TGATCATATT GCAAGTGCAA TTGGTGCCGC TGTATCTGCA
AGTGAAGGTG TTGATCTTTT GTGTTATCTT ACTCCTTCAG AACATCTTGC ATTACCAAAC
GCTGAAGAAG TAAAGGCTGG ATTAATTGCA TATCGAATTG CAGCACATGC AGGTGATCTT
GTAAAAATTC GTGATAAAGC GATCAAATGG GATATGGAGA TGACTGAAGC TCGACGTACA
CTAGATTGGG AAAAACAACT TGCATTGTCT ATTGATCCTG AAGAAGCTGC TAAAATTCAC
AGTAGAACAG GCCAACACCC TGGCAATAAT GTTCCTTGTA CTATGTGCGG AGGTGCATGT
GTTTACATGA TGTTGCCTCA ACAAAAAAAA TACGAGAAAG AAAACGAAAA CCTACAACAA
ATTGAATAA
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| Protein sequence | MATQMTAARR GVATDEMKQV AKDEDVTLDW LIPKIAKGSI IIPSNNCRPQ KIHNVGIGKG
LKTKVNVNIG TSTLNVNLEE EIEKAKVAVK YHADTMMDLS DGGDVKHIRK TLLETAPITF
GTVPIYEAYN YGVEVHKNPL NLTEDDYLNA FENNAKDGVD YTTIHCGITK DIAKRILKVQ
RYGGVVSKGG TITAAWMLKH DKENPYLTHY DYLVEMAKKY DVTFSLGDAL RPGSILDSHD
ELQVQEMINI SQLTKRAHEQ DVQVMVEGPG HVPLNEVAAN VRLAKSLIGD VPYYVLGPLV
TDVASGHDHI ASAIGAAVSA SEGVDLLCYL TPSEHLALPN AEEVKAGLIA YRIAAHAGDL
VKIRDKAIKW DMEMTEARRT LDWEKQLALS IDPEEAAKIH SRTGQHPGNN VPCTMCGGAC
VYMMLPQQKK YEKENENLQQ IE
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