Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0526 |
Symbol | |
ID | 5773683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 469360 |
End bp | 469671 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641316159 |
Product | translation initiation factor eIF-1A |
Protein accession | YP_001581860 |
Protein GI | 161528034 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
TIGRFAM ID | [TIGR00523] eukaryotic/archaeal initiation factor 1A |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAGC GCCAAGTAAA AAGTGAAAGT GCATTAAAAG AAATTCGTCT TCCTGAAGAA GGGGAACTTT TTGGCAGAGT TCTCAAGATG CTTGGTGGTG AAAATGTCTT AATCAAATGT ACTGATAATG TCACAAGACG AGGTAGAATC CGTGGTAAAC TAAAGAGAAG AGTTTGGATA AGAGATAATG ATATTGTAAT TATTGCGCCA TGGGACTTTA ATGAAGCTGA AAAAGGTGAT ATTGTTTGGA GATTTACACT CCCTCAAGTC GAATGGTTAA AGGAAAACGG ACACATTCCA AAAGATTTCT AA
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Protein sequence | MGKRQVKSES ALKEIRLPEE GELFGRVLKM LGGENVLIKC TDNVTRRGRI RGKLKRRVWI RDNDIVIIAP WDFNEAEKGD IVWRFTLPQV EWLKENGHIP KDF
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