Gene Nmar_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0526 
Symbol 
ID5773683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp469360 
End bp469671 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content37% 
IMG OID641316159 
Producttranslation initiation factor eIF-1A 
Protein accessionYP_001581860 
Protein GI161528034 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGC GCCAAGTAAA AAGTGAAAGT GCATTAAAAG AAATTCGTCT TCCTGAAGAA 
GGGGAACTTT TTGGCAGAGT TCTCAAGATG CTTGGTGGTG AAAATGTCTT AATCAAATGT
ACTGATAATG TCACAAGACG AGGTAGAATC CGTGGTAAAC TAAAGAGAAG AGTTTGGATA
AGAGATAATG ATATTGTAAT TATTGCGCCA TGGGACTTTA ATGAAGCTGA AAAAGGTGAT
ATTGTTTGGA GATTTACACT CCCTCAAGTC GAATGGTTAA AGGAAAACGG ACACATTCCA
AAAGATTTCT AA
 
Protein sequence
MGKRQVKSES ALKEIRLPEE GELFGRVLKM LGGENVLIKC TDNVTRRGRI RGKLKRRVWI 
RDNDIVIIAP WDFNEAEKGD IVWRFTLPQV EWLKENGHIP KDF