Gene Nmar_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0520 
Symbol 
ID5773486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp464980 
End bp465363 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content33% 
IMG OID641316153 
Product30S ribosomal protein S8e 
Protein accessionYP_001581854 
Protein GI161528028 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2007] Ribosomal protein S8E 
TIGRFAM ID[TIGR00307] ribosomal protein S8.e 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAAAAT CAGTAGAAAA TTTAGCAACC AGTAAAACAA CTGGAGGAAG AAGACATCCA 
CTTAGAATTA GAAGAAAGTA TGAAACTGAT AGATATCCAA ATGAAGCAGT AACAGGAGCT
CAAGTTACAG TAACAAGAAC AGTTCGTGGA AAGAATAGAA AGACAGCTGT TAAGACAATT
GATTTTGTTA ATCTTGCAAC AGGAGATGCA AAAGTAAAGA AAGCAAAAAT TCTCAAAGTG
TTAGACAATA CAACAAACAA TGATTACAAA AGACGTGGCA TTATTACAAA AGGTGCAATA
CTAGAAACAC AAGAAGGTAA ATGCAAAGTA GTTTCTAAAC CAGGACAAAA CGGAATCGTT
AACGCAATTT TAGTAAAGGA ATAA
 
Protein sequence
MRKSVENLAT SKTTGGRRHP LRIRRKYETD RYPNEAVTGA QVTVTRTVRG KNRKTAVKTI 
DFVNLATGDA KVKKAKILKV LDNTTNNDYK RRGIITKGAI LETQEGKCKV VSKPGQNGIV
NAILVKE