| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0517 |
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| Symbol | |
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| ID | 5774068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 463382 |
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| End bp | 464338 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641316150 |
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| Product | zinc finger TFIIB-type domain-containing protein |
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| Protein accession | YP_001581851 |
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| Protein GI | 161528025 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC TAGAAGAACA AAACTGTCCT GAATGTCAAG CAACAGTAGT TAATGACATG
CAGAATGGTG AATTAATCTG CTCTGGTTGC GGTGTAGTAG TCGCAGATCA AGTAGCAGAT
TATGGTCCAG AAACAATTAG TTCGAATCTT GAAGACAAGA TGAAATTAGC AAGAGCAACC
GGACAAACAA CATATTCCCA ACACGATTTG GGAATTACGA CTGAGATAGC AATTAGTACA
AAGGACTTTA GTGGAAAAAC AATCAACCAC GAAGTTGCAA ACCAAATGCA CAATCTCAGA
AAGTGGCAAC AAAGAGTAAG AGTATCCTCA CCAAAAGAGA GACGACTTGC AAATGTTTTA
ACAAAAATGG GAGAAACATG TGACGGTCTA GGTCTTTCAA AAAATGTGTT GGAGACTGCT
TCTATGATAT ACAGAAACTT GGACGGACAT GTTGATGTGA AGGGAAAATC AGTAGTAAGC
ATTACAGCAG CTACAATTTA CATGGCATGC AAACAATGTG ATGTAGTAAG ATCACTAGAA
GAAATTATTC GTGGAATTTG TCCACCAAAA GACGTAAAAT CAAAAACAAA ACTTGCAGCA
AGATACTACA GAACCATGGT TATGGAAATG GGACAACTAA CTGCTCCAGT AGTAACTATG
GACAAATACA TCTCAAAGAT AGCAAACATG ACACAAACTG AGGTTAGAGT AGAGAGACTA
GCCTTGGAAA TTGCAGAAAA AACAAAAGAC AGTAGTATTG CTGATGGAAA GGCTCCAAAT
GGAATTGCTG CAGCATACCT GTATGTGTCA TCAGTCCTGC TTGGTCAAAA CGTACTCCAA
AGAGACGTTT CAAGCATTGC AGGAGTAACT GAAGTTACTA TCAGAAATAG ATGTAAAGAG
ATTCTAACAA ATTACAAACT CAAAATTACT TTGAGACCAT CTCTGGCCAA ATATTAA
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| Protein sequence | MNALEEQNCP ECQATVVNDM QNGELICSGC GVVVADQVAD YGPETISSNL EDKMKLARAT
GQTTYSQHDL GITTEIAIST KDFSGKTINH EVANQMHNLR KWQQRVRVSS PKERRLANVL
TKMGETCDGL GLSKNVLETA SMIYRNLDGH VDVKGKSVVS ITAATIYMAC KQCDVVRSLE
EIIRGICPPK DVKSKTKLAA RYYRTMVMEM GQLTAPVVTM DKYISKIANM TQTEVRVERL
ALEIAEKTKD SSIADGKAPN GIAAAYLYVS SVLLGQNVLQ RDVSSIAGVT EVTIRNRCKE
ILTNYKLKIT LRPSLAKY
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