Gene Nmar_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0509 
Symbol 
ID5773055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp456304 
End bp457284 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content36% 
IMG OID641316142 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001581843 
Protein GI161528017 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTC CTACTAGACG TCTAAGAAGA CTAAGAACAT CAGAGAAGAT GAGAGAATTA 
GTTCAAGAGA CTAGACTGTC TCCAAGTGAT TTGATTTGTC CAATTTTTGT TCAAGAGGAC
ATAAAAACTA GAATCAAAAT TGAATCAATG CCATCAATTG AAAGACTTCC TTTAGACGAT
GTCACAGACG AAGTTGGAAC TATTAGTGAT TTAGGAATTC CTGCAATCAT GTTATTTGGA
ATTCCTAGTA ACAAAGATGA AACAGGTTCA TCAGCATTTG ACGATAACGG GATTGTACAA
AAGGCAATTT CTCAAGTTAG AGAGAATTTT GGAGACAAAA TAGTAATTAT GGCAGATACC
TGTCTATGTC AATTTACATC TACAGGACAT TGTGGAGTTA TTTCTAACAA TAAAGTCGAT
AATGATGCAA GTCTTGAACT TTTAGCAAAA ACAGCAGTAA GCCAAGCAAA AGCTGGAATG
GATACATCAT CACCATCAGC AATGATGGAC GGTCAAGTTG CAGCAATAAG AAATGCATTA
GATGATGAAG GTTTCTCAGA TGTTTCAATA ATGTCTCATG CTGCAAAACA TCGTTCAAAT
TTTTATTCAC CTTTTAGAGA TGCAGCAGCA TGTGCTCCAG AATTCGGAGA TAGAAAAACA
TACCAAATGC CTTACACCAA CGCAAGAGAA GCAATGATGG AAGTTGAAAC TGACATTAAT
GAAGGAGTAG ACATTGTTAT GATAAAACCA GCATTATCTT ATTTGGATTT GATATCTGAA
ACAAGAAGAA GATTCAATAT TCCAGTAGCT GCATACAGCG TTTCTGGAGA ATATGCATTG
GTAAAAGCAG CTTCACAATT AGGATATGTA AATGAAAATG AGGTCACTGA TGAGATCTTG
TCTTCCATTA AAAGAGCAGG GGCAGACATG ATTGTTACTT ATTTTGCAAA ATCTGCTGCA
AAATTCATGC AAGAATCATG A
 
Protein sequence
MSFPTRRLRR LRTSEKMREL VQETRLSPSD LICPIFVQED IKTRIKIESM PSIERLPLDD 
VTDEVGTISD LGIPAIMLFG IPSNKDETGS SAFDDNGIVQ KAISQVRENF GDKIVIMADT
CLCQFTSTGH CGVISNNKVD NDASLELLAK TAVSQAKAGM DTSSPSAMMD GQVAAIRNAL
DDEGFSDVSI MSHAAKHRSN FYSPFRDAAA CAPEFGDRKT YQMPYTNARE AMMEVETDIN
EGVDIVMIKP ALSYLDLISE TRRRFNIPVA AYSVSGEYAL VKAASQLGYV NENEVTDEIL
SSIKRAGADM IVTYFAKSAA KFMQES