| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0489 |
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| Symbol | |
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| ID | 5774714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 440199 |
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| End bp | 440882 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316121 |
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| Product | major intrinsic protein |
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| Protein accession | YP_001581823 |
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| Protein GI | 161527997 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGTATT CAAATTTACA GATTTTTACT GTGGAATTAA TTGGAACTTT TATTCTTGTC
ATCTTTGCAA CTGGTTCCAT TGTTTATGAT GCAGAATTTT TTGATGGACA ATTAGGAATT
CCATTTGCTG CCATTGCACC ATTCATTGCA CTACTAATTG GTGTCTATTC TTTTGGTAAA
ATTTCTCTTG CACATTTCAA TCCTGCAGTA ACCATTGGAT ACTATATCAC AGGACACATA
ACCAAAATTC AGATTTTGTA TTATTTTGCA GCTGAAATTA TTGGTGCACT ATTAGGTTCT
CTATTTGTCA TGAAAGTTAT TGGAGAAAAA GCAAATCTTG GAGCCAATGC ACCAAACTAT
GATTTTTCGT TAGGTTTGAT TTTTCCAGTT GAAGTATTGG CATCTGCAAT GCTTATGGGT
GTAATCTTCT ACGTGGTGTA TACAAAAGGA CTGAAAGGAT TTAGTGGAGT TGCCATTGGT
GGAATTGTCG GATTGGATAT TTTGTTTTTA GCATTTATCT CAGGAGCTTC TATGAATCCT
GCAAGAGCAC TTGCTCCTGC ATTACTATCT GGTACTTTTA GTGATTTGTG GCTATATTGG
ACTGCACCTT TTATTGGAAC CATGATTGTG GCTTTTCTAT TTCGTGGCAA ATTCCAAGCC
CAACGAGCCT CAAATTACGA ATAA
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| Protein sequence | MAYSNLQIFT VELIGTFILV IFATGSIVYD AEFFDGQLGI PFAAIAPFIA LLIGVYSFGK
ISLAHFNPAV TIGYYITGHI TKIQILYYFA AEIIGALLGS LFVMKVIGEK ANLGANAPNY
DFSLGLIFPV EVLASAMLMG VIFYVVYTKG LKGFSGVAIG GIVGLDILFL AFISGASMNP
ARALAPALLS GTFSDLWLYW TAPFIGTMIV AFLFRGKFQA QRASNYE
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