| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0477 |
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| Symbol | |
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| ID | 5774452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 429251 |
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| End bp | 430828 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316109 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_001581811 |
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| Protein GI | 161527985 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.176502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAACAA TTTCACTTGC TGTAGCCGTA ATTACTGCAA TTTTGCTATC TGGAACTTTT
GCTCCATCTT CATATGCATT AGGTGATTAT GATTTTCTTG CTGGATGGGG TGAGTTTGGA
ATATCTACTC CTGGACACCT TTCACACCCA CAATTTATCG CAGTTGATGA TGAAGGGAAT
GCATACATTA GTGATTTAGG AAATAAACGT GTACAAAAAT TCTCCAGCTC TGGTGAGTTT
ATTCTTAACT TTGGAGAAAG TGGCAAATCC TCTGGCCAAT TCCATCACCC TTCCGGTGTT
GCAGTTGATT CTGATTTTGT CTATGTGGCA GATCAAAATT TGCATAAAAT TCAAAAATTT
ACCCTTGATG GAGTGTTTGT AGATGAATGG GGAAAATACG GTAACCAAGA TGGTCAATTC
AAGTCCCCAA AAGATATTGC AGTAGACTCT GATTTTCTTT ATGTTGTAGA TGCTGATAAC
TATCGAATCC AGAAATTTAC TACTGATGGA GAATTTGTAT TATCTTTTGG TTCTGGTGGT
ATGAATCATG ATCAATTTCT TATTTTATCT GGAATAGCAG TTGATGATGA TGGAAATATC
TACATCACAG ACAAAGGAAA CCGTAAAATT GAAAAATTTA CTTCTGATGG AATTTTGATT
AAATCTTATC CACTATTTGG TACAAACTAT GTATTTGCTC CTACGGGAAT CACTGTTGAT
TCTGATGGGA AAATATTTGT CATAAACTCT GCAGAAAACA GGATTTTGTA TCTTGAACTT
GATGATAATT TACGTCTAAG TGTATTTGAG CAACTTGGAC CATTTGGTAA CTCCTTTATT
GCTCCAACTG ATCTTACCTT TGGATTTCAA GGTAACTTGT TGATAGTAGA TTCTGCTGCT
CATAAAGTAA AATCCTTTGA AACCCCATTT TATGATGAAA CAAAAGTTTT TCAAACAACT
GAAATTATTG CACCAGAAAT AACTGAAGGT TATGAATCTG ATGATATTGA TCCAACAATT
ATGGCTCCAA GTGACATAAA ATTAGAAGCA ACTGATCTAT TTACTCCTGT ACCTATTGGT
GATGCTGTTG CAAATGACTT GCAGAGTGGA ATCAAAACTA TTTTGAATAA TGCTCCTGAG
GCATTCTCTT TGGGTGTAAA CAAGGTAACT TGGGTAGCAT TTGATAATGC TGGAAACACT
GCTGAAGACT ATCAAACAGT TACAGTCTTT GCATGTGGTC ATGTCTATTC TGATTACAAC
ATGATAGTTG GAACTGATGA GAATGATGTT CTTCTGGGAA CCTCTGGTGA TGATCTAATC
TTTGGGTTAG AAGGAAATGA TATCATTAGT GGGTTAGAAG GAAATGACTG TATCTTTGGC
GGTGATGGTG ATGATATTGT CTATGGCGAT GATGGATATG ACACCATTAG TGGAAACGGT
GGACATGATG TCCTCAAAGG AGATTCTGGA TCTGATGTAA TCTATGGTGG ATCAGGCTCT
GATGTACTTG ATGGCGGTTC TGAGAATGAC AACTGCTATG ATTCACTAGA AAATGTTGTT
CTTAATTGCA ACGAATAG
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| Protein sequence | MKTISLAVAV ITAILLSGTF APSSYALGDY DFLAGWGEFG ISTPGHLSHP QFIAVDDEGN
AYISDLGNKR VQKFSSSGEF ILNFGESGKS SGQFHHPSGV AVDSDFVYVA DQNLHKIQKF
TLDGVFVDEW GKYGNQDGQF KSPKDIAVDS DFLYVVDADN YRIQKFTTDG EFVLSFGSGG
MNHDQFLILS GIAVDDDGNI YITDKGNRKI EKFTSDGILI KSYPLFGTNY VFAPTGITVD
SDGKIFVINS AENRILYLEL DDNLRLSVFE QLGPFGNSFI APTDLTFGFQ GNLLIVDSAA
HKVKSFETPF YDETKVFQTT EIIAPEITEG YESDDIDPTI MAPSDIKLEA TDLFTPVPIG
DAVANDLQSG IKTILNNAPE AFSLGVNKVT WVAFDNAGNT AEDYQTVTVF ACGHVYSDYN
MIVGTDENDV LLGTSGDDLI FGLEGNDIIS GLEGNDCIFG GDGDDIVYGD DGYDTISGNG
GHDVLKGDSG SDVIYGGSGS DVLDGGSEND NCYDSLENVV LNCNE
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