Gene Nmar_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0475 
Symbol 
ID5773678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp427396 
End bp428397 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content34% 
IMG OID641316107 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_001581809 
Protein GI161527983 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0408472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGTATT CAATTGAAAC AAAATCTCTA ACAAAATCAT TTGGTGATGT TACTGCAGTA 
GACGATGTTT CCTTTACTGT TGAAAGCGGT GAGATCTTTG GATTTCTTGG ACCTAATGGT
GCTGGAAAAA GTACAACAAT GATGATTCTA ACAACTTTAC TAAAACCAAC ATCAGGACAA
GCTTTGATTT CTGGGTATGA TGTAATGGCA AATCCAAAAA ATGTTCGTCA AAACATTGGA
TATGTCCAAC AAGAAACTAC TGTTGATGAA TATCTTACAG GGCGTGAAAA TCTTATCCTA
CAAGCAAAAC TCAATCATAT TCCAAAAAAT GAGATTGATT CAAGAATTGA TGAAGTTTTA
GATTTAATTG AATTATCTGA TAAACAAAAC GAGTCAGTTG TAACCTACTC TGGTGGAATG
AGAAAAAGAT TGGATATTGC AGGTGGGCTA TTACACCGTC CCAAGGTTTT GTTTTTAGAT
GAGCCTACTG TTGGCCTTGA TATTCAAACG AGGAGAAAAA TTTGGGAGTA TATCAAAAGG
ATTCATGATG AGTTTGAGAT GACAATATTC CTTTCAACTC ACTATATGGA AGAGGCTGAT
CAACTATGTG ATAGAATTGG AATTATTGAT GGTGGAAAAA TCCAAGTAAT TGATTCTCCT
AAAAACATGA AAAATGCTAT GGGAAATGAA GTCATTTCAA TTGTAATTGA AGAGAGTGAC
TCTGGAGATT CTTTCTTATC TGAACTACAC AAAATAGAAT CTGTAAACAA AATCAATGAA
GATGATTCAA AACTTACTCT CTTTGTCTCA AATGGAACTG AAGTAATTCC CAAAGTCTTT
CAGATTTCAT CAAACATTGG AATCAAAATT ACTTCTATCT CGTTGACTCA ACCAACACTT
GATGACGTCT TTATCTCTTA CACTGGACAT GAAATTCGAG ATGATGATGG AACTTTTAAT
CGAAAACGAG AACATGCAAA AATGAAGAGG TTACGTGCAT GA
 
Protein sequence
MLYSIETKSL TKSFGDVTAV DDVSFTVESG EIFGFLGPNG AGKSTTMMIL TTLLKPTSGQ 
ALISGYDVMA NPKNVRQNIG YVQQETTVDE YLTGRENLIL QAKLNHIPKN EIDSRIDEVL
DLIELSDKQN ESVVTYSGGM RKRLDIAGGL LHRPKVLFLD EPTVGLDIQT RRKIWEYIKR
IHDEFEMTIF LSTHYMEEAD QLCDRIGIID GGKIQVIDSP KNMKNAMGNE VISIVIEESD
SGDSFLSELH KIESVNKINE DDSKLTLFVS NGTEVIPKVF QISSNIGIKI TSISLTQPTL
DDVFISYTGH EIRDDDGTFN RKREHAKMKR LRA