Gene Nmar_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0443 
Symbol 
ID5774721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp391108 
End bp392055 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content38% 
IMG OID641316073 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001581777 
Protein GI161527951 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00000481953 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTTTAC TTCTCAAAGA TCGAGTTTGG TCAATGGAAG CCCCTACTGC AAAACGTGGA 
GTTTATCCAT TACATGGATT CAAACTTGGA TTGTATAGAT TGCCAATTAA TCTTGAAGAT
CCTAATGAGA TAAAATCAGT CCATGATGGT CTCAAAAAGG CTTTTGAGAT GGACAAGTAC
GCTGATAGAG TTTTTGCAAC ATATCGCTGG ACTGAACAAA ACATGGATGA TCCTGATGCA
AAGGGATACG AAGAAGTAGA ACTATCAGTT ACAGTTGAAA TTGTCACTGG TGAAGTTGTA
GATATTATTT ATCAGATTTT CCCAATTGAA AAGTTCGGTG ATCCTAATTG GGTCAAAGAT
TATAGAAAGA AAGCAGACCA TTTTGCAAAA ATGGTAATTG ATACTATTTT ACGTAACACT
ATCTTGGCAG ACAAGATGAT TTCTTACTTT GCAAAAGCAG AAAAAATTTC TGAAGTTGCA
GCTATTCAAA AACTTGAAGA CCTTACTCCT TTAGCAAAGA TTGTTCTTGG TGCAAAACCA
AAACCAGTTG AGGCTACTGA AGAAGCTGAA GAAGAAGATG AAGGTGATAT GGAGATTCCA
GATGGTGCAA AGCCTGGACC AATTGATGTT GATTACAAAC AAAAAATGAA AGCATCTACA
GCATATGAAG CAGCAGAACA CACAATCAAA ACTTGGGGTA GAAAAGGCAC CAGTAATGGA
ATCATGGGTG TTTGGGGAGA ATTTGTTTCA GTAGATTATG ATATTTGTGT AGCAGATGGT
GGATGCATTG AAGCATGCCC AGTAGGTGTG TATGAGTGGT TTGATACTCC TGGAAACCCT
GCATCTGACA AGAAACCACT AATGTCAAAA GAACCTGATT GTATATTCTG TCTTGCATGT
GAAGGTGTAT GTCCGCCACA AGCAATCAAG ATCTTCGAAC AAAAATAG
 
Protein sequence
MSLLLKDRVW SMEAPTAKRG VYPLHGFKLG LYRLPINLED PNEIKSVHDG LKKAFEMDKY 
ADRVFATYRW TEQNMDDPDA KGYEEVELSV TVEIVTGEVV DIIYQIFPIE KFGDPNWVKD
YRKKADHFAK MVIDTILRNT ILADKMISYF AKAEKISEVA AIQKLEDLTP LAKIVLGAKP
KPVEATEEAE EEDEGDMEIP DGAKPGPIDV DYKQKMKAST AYEAAEHTIK TWGRKGTSNG
IMGVWGEFVS VDYDICVADG GCIEACPVGV YEWFDTPGNP ASDKKPLMSK EPDCIFCLAC
EGVCPPQAIK IFEQK