Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0428 |
Symbol | |
ID | 5773699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 382339 |
End bp | 383004 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316058 |
Product | RNA polymerase insert |
Protein accession | YP_001581762 |
Protein GI | 161527936 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0123472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACTTTG AAGATTTTCA TCAAGATTTG TCATCCTTAG AAGTAATTAG CAAAGATAAT CAAAAAATAG CTTTAAAGCT CAAAGGCGTA CCATTACAAT ATGCAAATGC CCTAAGACGT GTTTGTCTCA ATGGTGTTCC AGTCTTTGCA GTTGACACAG TTGATATTAT TGAAAATTCA TCAGTTTTAC CAGATGAAGG TTTAGCACAT AGGTTAGGTC TCATACCACT CAAAACGGAT TTGAGCAGAT TTAACGAGCC ATCAAAGTGT GAGTGTCAAA GTGAAACAGG ATGTTCAAAT TGTAAGGTAA TGTTAGTTTT AGATTCTGGA GATTCAGATG TTACAAGAAC AGTTCTATCA AACGAACTAT CATCTGAAGA CGACTCTATT ACTCCAATAT CAGACAAAAT TCCAATTGTA GAACTTGCAC CAGGTCAAAG AATCAAAGTT GAATGTTATG CAAGACTTGG ACGGGGTACA GAGCATGCAA AATGGAATTC TGCAAATGTT TCAATGTTAA CTGAAACAGA CAAGGATGAT GAGAGAATTC TTACTGTTGA ATCAACTGGA GCACTTAATC CTGAGCAAAT TATCTTGTCA GGAGTAGAAG AAGTAGGTCA TAGATTGGCC GAATTCAAAG ATACAATCGA CCAAATCAGC GAATAG
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Protein sequence | MDFEDFHQDL SSLEVISKDN QKIALKLKGV PLQYANALRR VCLNGVPVFA VDTVDIIENS SVLPDEGLAH RLGLIPLKTD LSRFNEPSKC ECQSETGCSN CKVMLVLDSG DSDVTRTVLS NELSSEDDSI TPISDKIPIV ELAPGQRIKV ECYARLGRGT EHAKWNSANV SMLTETDKDD ERILTVESTG ALNPEQIILS GVEEVGHRLA EFKDTIDQIS E
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