Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0427 |
Symbol | |
ID | 5773189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 381948 |
End bp | 382295 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641316057 |
Product | 50S ribosomal protein L15 |
Protein accession | YP_001581761 |
Protein GI | 161527935 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1727] Ribosomal protein L18E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0179174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAATC AAGTAGTTAT ACGCATGGCA AAGGATCTAA AGTCTGCATC AGCTAAAAAC GATGCTCCAA TTTGGGCAAA ACTAGCAGAA TATGCACTAA AACCATCTAT TGCCAGAAGA GACATTAACT TGAATAAAAT CGCTAAACTA ACTAAAGAAA ACGACACTGT CGTATTTCCA GGAAAAGTTC TTGGAACAGG CAATGTACCT CACAAAATCA CATTATGTTC ATTTTCAATA TCAAACTCTG CAGCAACCAA AATTATTGAA AATGGTGGAA AACTAATCAG TTATTCAGAA TTAATCGAAC AAAACCCAAC TGGAAAAGGA GTAGTATTAC TTGGCTAG
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Protein sequence | MTNQVVIRMA KDLKSASAKN DAPIWAKLAE YALKPSIARR DINLNKIAKL TKENDTVVFP GKVLGTGNVP HKITLCSFSI SNSAATKIIE NGGKLISYSE LIEQNPTGKG VVLLG
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