| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0426 |
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| Symbol | |
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| ID | 5773077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 381491 |
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| End bp | 381955 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641316056 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_001581760 |
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| Protein GI | 161527934 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01077] ribosomal protein L13, archaeal/eukaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0183666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCTAGTC AAGAGACAGT TGTTAGAACT GACAGACCAA TCGTAGTAGA TGCAACCAAC
CATATTGCTG GCAGATTATC ATCAAATGTT GCAAAATTAC TAAAACAAGG ACACAGAGTT
TCAATTGTAA ACTGTGAGAA GATCATGTAC AGTGGAACTA GATCAAACTT GATTAAAGAA
TATAGAGAAT TTTTAGAAAT TAACAGTATC ATTAATCCAA AACACGGACC TGTACACTAC
AGAAGACCAG ATACAATCAT CACAAAAATG ATTCGTCAAA TGTTACCATA CGATAGAAAG
CCATCAGGTA AAGAGTCAAT TAAAAGACTA AGAGCATACA TTGGTTCTCC AAAAGAACTA
AAATCACTTG AGAAGATTCA ATTTGAGAAA GCAAAAATTA AAAAATCTCC ATCAAACTAC
ACCACGATGG GAGAATTATG CAGAGTAATA GGGTGGACTG AATGA
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| Protein sequence | MASQETVVRT DRPIVVDATN HIAGRLSSNV AKLLKQGHRV SIVNCEKIMY SGTRSNLIKE
YREFLEINSI INPKHGPVHY RRPDTIITKM IRQMLPYDRK PSGKESIKRL RAYIGSPKEL
KSLEKIQFEK AKIKKSPSNY TTMGELCRVI GWTE
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