| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0421 |
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| Symbol | |
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| ID | 5773870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 377852 |
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| End bp | 378334 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316051 |
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| Product | 3-isopropylmalate dehydratase small subunit |
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| Protein accession | YP_001581755 |
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| Protein GI | 161527929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0517519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGGAA ACGTCATAAA ATATGAAAGA GACAACATCG ATACTGATGT AATTATTCCT
GGACAATACC TCAAGGTTCA TGATTATGCT GAACTTGCAA CTCACGCAAT GGAAGGTCTA
GATCCTGACT TTCATTCCAA AGTAAAGGAA GGTGATTTTA TCTTGTCTGG AAAGAATTTT
GGCTGTGGTT CATCACGTGA GCATGCCCCA ATTGCATTGT CTCACTCTGG CGTCAAGGCA
GTACTTGCGT TATCTTTTGC CAGAATCTTT TACAGAAATT CTGTTGATGG TGCATTTTTG
TTACCAATTG AAATTGAAGA AGATGCATAC AATGGAATCT CTGAAGGAGA TGAAATTGAT
ATTGACATTA GCAAAAACGA AATCAATAAC TTGACAAAAA ATCAAACATA CAAGATGAAA
CCATTCTCTG AGATTATTGG AAAAATAATT GAAGCTGGTG GTCTCTTTAA TTACAAACCA
TAG
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| Protein sequence | MKGNVIKYER DNIDTDVIIP GQYLKVHDYA ELATHAMEGL DPDFHSKVKE GDFILSGKNF
GCGSSREHAP IALSHSGVKA VLALSFARIF YRNSVDGAFL LPIEIEEDAY NGISEGDEID
IDISKNEINN LTKNQTYKMK PFSEIIGKII EAGGLFNYKP
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