Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0405 |
Symbol | |
ID | 5773485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 364336 |
End bp | 364896 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316034 |
Product | cytidylate kinase |
Protein accession | YP_001581739 |
Protein GI | 161527913 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1102] Cytidylate kinase |
TIGRFAM ID | [TIGR02173] cytidylate kinase, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.167171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACAAAAT CCATTGTAAT TTCAGGTCCT CCTGCTGTAG GAAAGACAAC TGTTGCAAAA GGATTGGCAG AAGAATTTTC ATTACAATAT CTTAGTGGCG GTGATGTCCT CAAAGAGATG GCAAAAGAAC AAGGTTTTGA TTCTGCAGGT GATGATTGGT GGGACACAGA AGAAGGAATG AAGTTTCTCA ACCAACGCGA AAAAAATTCT GAATTTGATA AAAAGTTGGA TGAAAAACTA ACAAAACTAT TCAATGAGGG TGGAATGGTA ATCACCAGCT ATACACTCCC TTGGTTAATC AAAGATGGGA TTAGAATCTG GCTTGAGGGG TCTCATGAGA GTAGCACAAA ACGAATGCAA ACTAGAGATG ATATGAGTTC TGAGGATGCC TATCAAATCA CAAAACAGAG GTTTGACAAA AACAAGGCTC TTTACAAAAA ACTCTATGAT TTTGATTTTG GTGATGACAA ATCAGTTTTT GATGTTATAA TAAATACTGA CAATCTTACA GCACAACAAG TAATTGATGT TGCAAAAGAA ACGGTGAGAA AACTACTATG A
|
Protein sequence | MTKSIVISGP PAVGKTTVAK GLAEEFSLQY LSGGDVLKEM AKEQGFDSAG DDWWDTEEGM KFLNQREKNS EFDKKLDEKL TKLFNEGGMV ITSYTLPWLI KDGIRIWLEG SHESSTKRMQ TRDDMSSEDA YQITKQRFDK NKALYKKLYD FDFGDDKSVF DVIINTDNLT AQQVIDVAKE TVRKLL
|
| |