Gene Nmar_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0405 
Symbol 
ID5773485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp364336 
End bp364896 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content36% 
IMG OID641316034 
Productcytidylate kinase 
Protein accessionYP_001581739 
Protein GI161527913 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1102] Cytidylate kinase 
TIGRFAM ID[TIGR02173] cytidylate kinase, putative 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.167171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAAAAT CCATTGTAAT TTCAGGTCCT CCTGCTGTAG GAAAGACAAC TGTTGCAAAA 
GGATTGGCAG AAGAATTTTC ATTACAATAT CTTAGTGGCG GTGATGTCCT CAAAGAGATG
GCAAAAGAAC AAGGTTTTGA TTCTGCAGGT GATGATTGGT GGGACACAGA AGAAGGAATG
AAGTTTCTCA ACCAACGCGA AAAAAATTCT GAATTTGATA AAAAGTTGGA TGAAAAACTA
ACAAAACTAT TCAATGAGGG TGGAATGGTA ATCACCAGCT ATACACTCCC TTGGTTAATC
AAAGATGGGA TTAGAATCTG GCTTGAGGGG TCTCATGAGA GTAGCACAAA ACGAATGCAA
ACTAGAGATG ATATGAGTTC TGAGGATGCC TATCAAATCA CAAAACAGAG GTTTGACAAA
AACAAGGCTC TTTACAAAAA ACTCTATGAT TTTGATTTTG GTGATGACAA ATCAGTTTTT
GATGTTATAA TAAATACTGA CAATCTTACA GCACAACAAG TAATTGATGT TGCAAAAGAA
ACGGTGAGAA AACTACTATG A
 
Protein sequence
MTKSIVISGP PAVGKTTVAK GLAEEFSLQY LSGGDVLKEM AKEQGFDSAG DDWWDTEEGM 
KFLNQREKNS EFDKKLDEKL TKLFNEGGMV ITSYTLPWLI KDGIRIWLEG SHESSTKRMQ
TRDDMSSEDA YQITKQRFDK NKALYKKLYD FDFGDDKSVF DVIINTDNLT AQQVIDVAKE
TVRKLL