| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0399 |
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| Symbol | rps5p |
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| ID | 5773867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 360068 |
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| End bp | 360784 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641316028 |
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| Product | 30S ribosomal protein S5P |
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| Protein accession | YP_001581733 |
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| Protein GI | 161527907 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0467584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAA CAACAGAATC TAAACCACAA GGCGGACAGA AAGGTAAAGG TGCCCCAACT
TATGGCGGAG GTAGACCTGA TGGTGCAAAA GGTGGAGATA GACCAAGAAG AAGAAGAGAA
CCAGAAGAAG AAGTTTGGGT TCCAAAAACA ATTCTTGGAC AAAAAGTTGC ATCAGGAGAA
ATTTCATCAC TAGAAGAAAT TATTGAATTA GGATTAAGAA TTCAAGAAGC AGGAATTATC
AAAAAATTAC TGCCTGACTT GAAGAGTGAA GTCGTTGATG TTGGAATTAT CCAAAAGATG
ACATCAAACG GTCAATCAAC AAGATTCAAA GCAATCGTTG CAACTGGAAA CGAGAACGGT
TACTTGGGAA TTGGACAAGG AAAATCAAAA CAAATGAGAA TTGCAATTGA AAAGGCAACA
AACGCTGCTT ATCTTAACGT CAATCCAATC AAGATGGGCT GTGGCAGTTG GGAATGCAGA
TGTGATCAAA AACATTCAGT ACCATTCAAA GTAAAGGGTA AAGGTGGAAG TGTTACAATT
GAAATTATTC CTGCACCTCG TGGATTAGGT CTTGTAGCAG GTGGTAAAAT TAAACGATTA
TTGGAGTTAG CTGGTCTAAA AGACGCTTGG ACTACTGCAA AAGGTTCAAC TCCTACAATG
AACTCTACTT CAAAAGCTAT CTTGGACTGT CTTAGACAGA CATTTAGTCA GGGTTGA
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| Protein sequence | MSQTTESKPQ GGQKGKGAPT YGGGRPDGAK GGDRPRRRRE PEEEVWVPKT ILGQKVASGE
ISSLEEIIEL GLRIQEAGII KKLLPDLKSE VVDVGIIQKM TSNGQSTRFK AIVATGNENG
YLGIGQGKSK QMRIAIEKAT NAAYLNVNPI KMGCGSWECR CDQKHSVPFK VKGKGGSVTI
EIIPAPRGLG LVAGGKIKRL LELAGLKDAW TTAKGSTPTM NSTSKAILDC LRQTFSQG
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