Gene Nmar_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0372 
Symbol 
ID5772947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp339073 
End bp340590 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content32% 
IMG OID641316001 
Producthistidine kinase 
Protein accessionYP_001581706 
Protein GI161527880 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG CCAAAAACCC ATGGGGTTTG ATCATATTTT CCATTATTGC AATTATAGTT 
ATTGGAAGTT GGGTATTAGT TGCAACACAA ATACTGAAAA ATAGTCCTGC AACATTTGAG
AATGTTCAGC AATATATTGG AGAAGTTAGA TATGCAGGAG AAATAGGAAG AGAATTATCA
AAACCAGTTA TCTCAAATGA TTTTTCAGAA GATAAAATTG TAAATCAAAA TGGAAACATC
CTGGAAATAG AATCATCTTA CGTTGTCACA AACGTCATTA CAAGTGAAAC AATAGGTGAA
AATGAAAATA CATACTATGT TGATGTCAAC ACAAGAAAAC ATGCAGATAA CAACCAATGG
TATTTCAAAT TTCCACCAAA CGTACAAAAA CAAGATTATG TTCTATTCCA CCCAAATATG
GGGGTCCCAG CTATGTTTGT TTTTGAAGGA ACAAAGGAGA TAAACGATGT TGAGCTTTAC
AATTTTTCAT GTCAAAGTAT GAGAGATGAT TTTTCTCATG CATATGAAAG GTTTTTACCA
GAAATTGTGT ATGGTGATCA AACATGCATA ACTAGCATAG AACCAGTAAC AGGTAAAACT
ATAGAATTTA CAATTTCATG GGATCTGTAT GTGATTAGAG ATGGAGAATA TATTTCAGTT
GAACAAGGTG AATCAGAAAC TTCAGAATTT TCAAAGAGTA CGCAATTACA ATCAGCATTA
GATACAAAGC AATTATTTTT CATCTATGAT TATGTTGTTC CAGTATTTTT GGTTCTAGTC
TTTGTATCAG TATTTTTTAC AATAATGTAC ATTAACAAAT CAAGCGAGAG AGGACAAATT
ATCATAGAGC AATTAGAAGA GATGCAAAAA ACTGAAAAGA TTACTACAAT AGGACATTTA
GCATCACGTC TTGCACATGA CATCCGAAAT CCACTATCAG TTATCCAAAT GACTACGGAT
ATTCTAAGTA ATAACCCAGA TATTTCAGAG AAATTCCAAA AATATGCAGG CTCAATTACT
GAGTCCATAC AGAGAATAAG CCATCAAGTA AACAACGTAC TTGATTATGT ACAACAAAAG
CCTCTAAATC TAACAAAGAT ACCAGTATCA AGAATAATTG ATTCAGCAGA AGGCAGCATA
AAGATTCCAG AAAACATAAC AATTGAAAAA ACCACAACAG ATGACGAAAT AGTATGTGAT
TATCATCTAA TCGAAATTGT TGTTATCAAC ATTATAACAA ATGCAATCTA CGCAATAACT
CCTGAAACTG GAAAAATAAA AATCGAGATA AGACGTGAAC ATCATTTAAT CAAAATAGAA
ATTAGTAATA CAGGTGAACC AATACCAGAA GAATCACTAG AGAAAATCTT TGAACCATTA
TACACTACTA AGCAAGAAGG AACTGGACTT GGACTCGCAA GCTGTAAGAG CATCATAGAT
CAACATAAAG GAACTATTTC AGTTAAAAAC GACCCTACCA CATTCACAAT AAAGTTACCA
AGGAATCTAG AAAATTGA
 
Protein sequence
MKKAKNPWGL IIFSIIAIIV IGSWVLVATQ ILKNSPATFE NVQQYIGEVR YAGEIGRELS 
KPVISNDFSE DKIVNQNGNI LEIESSYVVT NVITSETIGE NENTYYVDVN TRKHADNNQW
YFKFPPNVQK QDYVLFHPNM GVPAMFVFEG TKEINDVELY NFSCQSMRDD FSHAYERFLP
EIVYGDQTCI TSIEPVTGKT IEFTISWDLY VIRDGEYISV EQGESETSEF SKSTQLQSAL
DTKQLFFIYD YVVPVFLVLV FVSVFFTIMY INKSSERGQI IIEQLEEMQK TEKITTIGHL
ASRLAHDIRN PLSVIQMTTD ILSNNPDISE KFQKYAGSIT ESIQRISHQV NNVLDYVQQK
PLNLTKIPVS RIIDSAEGSI KIPENITIEK TTTDDEIVCD YHLIEIVVIN IITNAIYAIT
PETGKIKIEI RREHHLIKIE ISNTGEPIPE ESLEKIFEPL YTTKQEGTGL GLASCKSIID
QHKGTISVKN DPTTFTIKLP RNLEN