| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0355 |
|---|
| Symbol | |
|---|
| ID | 5773343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 321179 |
|---|
| End bp | 321778 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641315983 |
|---|
| Product | 30S ribosomal protein S7P |
|---|
| Protein accession | YP_001581689 |
|---|
| Protein GI | 161527863 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01028] ribosomal protein S7(archaeal)/S5(eukaryotic) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAA CAAAAAACTT GTTACTATTT AGAAAATGGG ATTTGTCTGA CATCGAAGTC
AAGGACCCAG GTCTTAAAAC TGCAATTTCC CTAAGAAAAC AAATCCTACC ATACACTTTT
GGTCGTTCTG CACTCAAAAG ATTCAACAAG GCAGATGTCA ACATTGTTGA GAGATTAATC
AACAAGACAA TGCACTTTGG TAAAAAATAT GCAAAGAACA CTGGTAGAAT GACTGGAAAG
AAAACCAAAG TTCTCAACAC AGTTAGAACA GCATTTACAA TTATTGAACT CAAAACTGGT
AAAAATCCCG TAGAAGTATT AGTTAGAGCA GTTGAAAATT CAGCTCCTAA TGAAGATACA
ACTAGAATTG TTTATGGTGG TACTGTTTAC CACGTATCAG TTGATGTTGC ACCAATTAGA
AGAGTTGACT TGGCTTTGAG ATTCATTGCT GATGCAATCA AAGAATCAAC ATTCTCCAAT
CCAAAACCAA TTGAAGAACA CATGGCAGAA CAACTAATCT TGGCTGCAGA AAACGATCCT
AATGCTCCTT CTGTAAAGAA GAAGAATGAA TTAGAAAGAA TCGCACAAGC ATCAAGATAG
|
|---|
| Protein sequence | MAQTKNLLLF RKWDLSDIEV KDPGLKTAIS LRKQILPYTF GRSALKRFNK ADVNIVERLI
NKTMHFGKKY AKNTGRMTGK KTKVLNTVRT AFTIIELKTG KNPVEVLVRA VENSAPNEDT
TRIVYGGTVY HVSVDVAPIR RVDLALRFIA DAIKESTFSN PKPIEEHMAE QLILAAENDP
NAPSVKKKNE LERIAQASR
|
|---|
| |