| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0351 |
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| Symbol | |
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| ID | 5773254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 318160 |
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| End bp | 319821 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641315979 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001581685 |
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| Protein GI | 161527859 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTAA TCTTAGGAAT CACCCTAGTG TTAACAGCTT TTACACCACT TGCATTCAAT
GATGTTTTTG CTGATTCATT TAATGTGAGT TTTAATCAGG ATAGTTATCA AACTGGTGAC
ACACTAGTAA TTTCTGGTCA AATAATTGAT TTTGGAATGC CTGTCATTGC TATGAGTATA
TTTGATCCTG ATGAAAAAAT CCTCACTGCA AATAGTTTAG AACTTTCTTC TGATGGTAGT
TTCTCAAAAA CCATTCCTTT AGAGTCTCCA TTTTATGAAA TGTCTGGAGA TTATCTCATA
AAATTAGACT ATGGACAAGT CACTGAAGAA CATAACTTTG TAATTGGTGA CATTATTTCT
GAATCTGAAA TTGCTCCTCA GGAGGTTGTT GCACTTGAAA TTATGTCTCT CTATACTGAA
AAAGAGCATT ACTTTGATGG TGATACAGTC AACATTTTTG GAACTGTGTC ATCCATAGAT
TCTCCTACTA TTCTCATAGG AGTTCATGAT CCATTTGGAA CTCCTGCTGG ATTTTATTTT
GGAAATATAA ACAATAACTT GGAGTTTTCC ACAAACTTTC TAATCAAAGA TGGAGTGAAT
TTTAAAGCTG AAGGAACTTA CTCGATTAAA GCTCATTATG CTGAAACTAG TGTAGAATAC
TTCTTTGAAT ATTCTGCAGA ATCATCTACA GAAACACAAA CAACTGAAGA CACAACACAA
ACAACTGAAG ACACAACACA AACAACTGAA GACACAACAC AAACAACTGA AGACACAACA
CAAACAACTG AAGACACAAC ACAAACAACT GAAGACACAA CACAAACAAC TGAAGACACA
ACACAAACAA CTGAAGACAC AACACAAACA ACTGAAGACA ATATACCTAG AGAATCTGTT
GAAGAAAAAA TAGTTTCACA AAATGAAGCA ATAACTGAAA CAATAAATGA AAAAACAGAA
ACTGAAACAA AAATTATTAC AAAAGAAACT CAAACAAAAA ATGATTCTGA AAATATTTTA
GAAAATGAAG AACATGATAA TCTTTCTGTA GAAGATATTG AGCTTGGAAA ATTATTAAAT
CAAATTAATC TCGATTGTGA TTCTAGCACT TTTGTTGATA CTATTTCTTA CTATGATGGT
ATGGGTCCTG CACTTTACAG ATTATGTCAA TTTGATAGTT CTTTGAATTT TTTTAATGAG
TCTTTGACTA GTGATCCTGA TAATGTTGAA ATTCTTGTCA ATAAAGGGTC TACACTAGGA
AAAATTGGAT TTGTTTCTGA AGCAATAGCA TATTATGATC ATGCTATCTC TCTTGATCCC
CAATACCTGC CTGCAAAAAA TAACAAAGCA AATGCCTTGG CTAATCTTGG AAATCTTGAT
GATGCCATTT TACTCTACAA TGAAATCTTA GAGGAAAATA CGAATTACTA TACTGCAAGA
ACAAATCTCA ATACTGCATT ATTACTAAAA TCTGAAACTT CTGAAACTTC TGATGTGATA
AGTACTGTTA AATCTGAAAT TGAAACTTCA CCTGAAAATA CTTCACCTGA AAACATTTTC
CCTGAAAAAA CAATCTCAAC AGAAAACAAA AATGAAACAC AATCAAACTT TTTTGAAGAA
TTAACTCGTG TATTTTCATC TTTGTTTGGT TTTACTGAGT GA
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| Protein sequence | MRLILGITLV LTAFTPLAFN DVFADSFNVS FNQDSYQTGD TLVISGQIID FGMPVIAMSI
FDPDEKILTA NSLELSSDGS FSKTIPLESP FYEMSGDYLI KLDYGQVTEE HNFVIGDIIS
ESEIAPQEVV ALEIMSLYTE KEHYFDGDTV NIFGTVSSID SPTILIGVHD PFGTPAGFYF
GNINNNLEFS TNFLIKDGVN FKAEGTYSIK AHYAETSVEY FFEYSAESST ETQTTEDTTQ
TTEDTTQTTE DTTQTTEDTT QTTEDTTQTT EDTTQTTEDT TQTTEDTTQT TEDNIPRESV
EEKIVSQNEA ITETINEKTE TETKIITKET QTKNDSENIL ENEEHDNLSV EDIELGKLLN
QINLDCDSST FVDTISYYDG MGPALYRLCQ FDSSLNFFNE SLTSDPDNVE ILVNKGSTLG
KIGFVSEAIA YYDHAISLDP QYLPAKNNKA NALANLGNLD DAILLYNEIL EENTNYYTAR
TNLNTALLLK SETSETSDVI STVKSEIETS PENTSPENIF PEKTISTENK NETQSNFFEE
LTRVFSSLFG FTE
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