Gene Nmar_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0350 
Symbol 
ID5774707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp316926 
End bp318104 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content34% 
IMG OID641315978 
Producthypothetical protein 
Protein accessionYP_001581684 
Protein GI161527858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTGATT TTTTATTTTT AATTTTTATT TTGCCATTTG CAACAGCTCA GGAAATTCCT 
GATTATGACA AACCGTATGC TCCAATATTC TTTGATAAAC CAATTTACTC TTGGACTGAT
AAAATACAAA TCAAAATAAT TGCTCCTAGT TGGAACACAG ACAAAGACTT GATTGATTCA
ATTGGCGATA ACAATGATAA TCCCATAAAA ATATCAACAC GAAGTCACTC GCTAGAACCA
TACAGACTAA CTGAAACAGA TGTGTCAAGT GGAATATTTA CTGGCGAAAT TATCCTAACT
GGTTTCTTAC ATGATGCAGA TGGTGATGGT GACTATGACA CAACTCCTAG GACTATTGGT
ACCGGTCCTA CTAGCGGGTT TTTGGAGGTT GAAAGAGATT CAGCAATTAC GGTATCTTTT
GAGTTTGCTG ATGGTGTAGT GCTATCTGAA TCTGTACCTG TGTCTTGGAA TCTTGGAACA
ATAGAATTTG AAAATGATGT TTTCTTTAAT GATGAATCTG TTACAGTTAG AATAATTGAT
CTTGACATGA ATCTAAACCC TGAAGCGATT GATCATGTTC CTGTAGAAGT TTTTTCAGAT
TCTGATGTTG GTGGAATTAC TGCAAATGCA ATAGAAACCT CTGAAAGCTC TGGTTATTTT
GTAGCTACAA TATCACTTAC TCAAAACTCT GCATCAAGCG GAAACAGACT CTACGCTGTT
CCTGGAGATG AAATTTCTGC TAGATACAGT GATCATACTT TACCAAAGCC CTATTCTGAA
TCTGATAATT TGGAAATTCA GGCTCAATCA AGAGTTGAAT CATCTGTTCC TTCAACAATG
AGATTGGAAA ATTCTGAAAT TAATATTTCT GATAGTTTTG GAAATTATCT CACTTCATTT
TCTTCTAATC AGCAAATTCA GATTGTCGGA AGTTTATCAA ACATGCAAGA ATTTGATCAA
AAATTCGTTT ATCTCTTTCA AATAAAAAAC TCTCAAAACT ATATTGAATC CCTCTCTTGG
ATTCAAGGTC AATTATCATA TGGACAAAAT CTTGATGTAT CTCAATCTTG GATCCCAAAA
AATTCTGGAG ACTACTTTGT TGAAACATTT GTTTGGACTT CACTAAAAGA TCCAACTGCA
TTGTCTGATC CACTTACAAG ATTAATTTCA GTTGAATGA
 
Protein sequence
MFDFLFLIFI LPFATAQEIP DYDKPYAPIF FDKPIYSWTD KIQIKIIAPS WNTDKDLIDS 
IGDNNDNPIK ISTRSHSLEP YRLTETDVSS GIFTGEIILT GFLHDADGDG DYDTTPRTIG
TGPTSGFLEV ERDSAITVSF EFADGVVLSE SVPVSWNLGT IEFENDVFFN DESVTVRIID
LDMNLNPEAI DHVPVEVFSD SDVGGITANA IETSESSGYF VATISLTQNS ASSGNRLYAV
PGDEISARYS DHTLPKPYSE SDNLEIQAQS RVESSVPSTM RLENSEINIS DSFGNYLTSF
SSNQQIQIVG SLSNMQEFDQ KFVYLFQIKN SQNYIESLSW IQGQLSYGQN LDVSQSWIPK
NSGDYFVETF VWTSLKDPTA LSDPLTRLIS VE