Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0329 |
Symbol | |
ID | 5773133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 289894 |
End bp | 290664 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641315957 |
Product | ABC transporter-like protein |
Protein accession | YP_001581663 |
Protein GI | 161527837 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAGC AAAAATCGGT TCGAAGAAAC ATGAATGACG AACAAACATT TCCAATTGAA ATCAAACATC TTTCTGTTAC CTATCGTACT GAACCTGCAT TATGGAATTT AGATCTAAAT CTACCTGAAG GACAATTAAT TGCAATTGTT GGTCCAAATG GTGCAGGTAA ATCTACTTTG ATAAAAGCAG TAATGGGATT GGTTCCAATC ACTGCAGGCA AAGTAAGCAT TTATGGAAAA CAATATTCAA AACAAAGAAG CAAAGTGGCG TATGTTCCAC AACGTGGAAC TGTTGATTGG GATTTCCCTA CTGATGCATT AGATGTTGTA GAGATGGGGC TTTATGGAAA ACTTGGATGG TTACGTCGTC CTAATTCTCA AACAAAAGAG AAAGCAAGAG AATGTTTGGA AAAAGTTGGG TTAAAGGATT ATGCAGATAG ACAAATTGGT CAGTTGTCTG GAGGCCAACA ACAAAGAGTA TTCCTTGCAA GAGCTTTGGC CCAGGATCCT CAAATTTATC TTATGGATGA GCCATTAAAC GGAGTTGATG CAATTACAGA AGAGACAATA CTCTCAATTC TTGAGGATCT AAAAAAAGAA GGAAAGACAA TTGTGATGGT TCATCATGAT CTGCAAACTG TGGACAAGTA TTTTGATTGG GTTGTAATGC TAAATAGGAA TCTGATATCT GCTGGACCAA TAAAAGAAGT ATTTACAAAA GAAAATTTGG ATATTGCGTA TCAAGAAAAA CAACGCATGT CTATTCAATA A
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Protein sequence | MMEQKSVRRN MNDEQTFPIE IKHLSVTYRT EPALWNLDLN LPEGQLIAIV GPNGAGKSTL IKAVMGLVPI TAGKVSIYGK QYSKQRSKVA YVPQRGTVDW DFPTDALDVV EMGLYGKLGW LRRPNSQTKE KARECLEKVG LKDYADRQIG QLSGGQQQRV FLARALAQDP QIYLMDEPLN GVDAITEETI LSILEDLKKE GKTIVMVHHD LQTVDKYFDW VVMLNRNLIS AGPIKEVFTK ENLDIAYQEK QRMSIQ
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