Gene Nmar_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0329 
Symbol 
ID5773133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp289894 
End bp290664 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content36% 
IMG OID641315957 
ProductABC transporter-like protein 
Protein accessionYP_001581663 
Protein GI161527837 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGC AAAAATCGGT TCGAAGAAAC ATGAATGACG AACAAACATT TCCAATTGAA 
ATCAAACATC TTTCTGTTAC CTATCGTACT GAACCTGCAT TATGGAATTT AGATCTAAAT
CTACCTGAAG GACAATTAAT TGCAATTGTT GGTCCAAATG GTGCAGGTAA ATCTACTTTG
ATAAAAGCAG TAATGGGATT GGTTCCAATC ACTGCAGGCA AAGTAAGCAT TTATGGAAAA
CAATATTCAA AACAAAGAAG CAAAGTGGCG TATGTTCCAC AACGTGGAAC TGTTGATTGG
GATTTCCCTA CTGATGCATT AGATGTTGTA GAGATGGGGC TTTATGGAAA ACTTGGATGG
TTACGTCGTC CTAATTCTCA AACAAAAGAG AAAGCAAGAG AATGTTTGGA AAAAGTTGGG
TTAAAGGATT ATGCAGATAG ACAAATTGGT CAGTTGTCTG GAGGCCAACA ACAAAGAGTA
TTCCTTGCAA GAGCTTTGGC CCAGGATCCT CAAATTTATC TTATGGATGA GCCATTAAAC
GGAGTTGATG CAATTACAGA AGAGACAATA CTCTCAATTC TTGAGGATCT AAAAAAAGAA
GGAAAGACAA TTGTGATGGT TCATCATGAT CTGCAAACTG TGGACAAGTA TTTTGATTGG
GTTGTAATGC TAAATAGGAA TCTGATATCT GCTGGACCAA TAAAAGAAGT ATTTACAAAA
GAAAATTTGG ATATTGCGTA TCAAGAAAAA CAACGCATGT CTATTCAATA A
 
Protein sequence
MMEQKSVRRN MNDEQTFPIE IKHLSVTYRT EPALWNLDLN LPEGQLIAIV GPNGAGKSTL 
IKAVMGLVPI TAGKVSIYGK QYSKQRSKVA YVPQRGTVDW DFPTDALDVV EMGLYGKLGW
LRRPNSQTKE KARECLEKVG LKDYADRQIG QLSGGQQQRV FLARALAQDP QIYLMDEPLN
GVDAITEETI LSILEDLKKE GKTIVMVHHD LQTVDKYFDW VVMLNRNLIS AGPIKEVFTK
ENLDIAYQEK QRMSIQ