Gene Nmar_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0323 
Symbol 
ID5774248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp284600 
End bp286360 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content33% 
IMG OID641315951 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_001581657 
Protein GI161527831 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTCAA TTATCGGCTA TTATGGAAAA GAAACTGCAG CACCCATAAT CGTAAAGGGT 
CTAAAGAGAA TGGAGTATAG AGGATATGAT AGTGTAGGAG TTGCAACAGA ATCAGAAAAC
CAAATTGGAT TGAAAAAAGG GACTGGAAAA GTACAAGAAG TCAATTCAAA AGTACAATTA
GAAACATTAC CTGGAAGAGT TGGAATTGGT CATACCAGAT GGGCAACACA TGGAAAGGTA
ACAGATGTAA ATGCTCATCC ACATCCTAGC AATTCAGGAA AAATTGCAAT TGTTCATAAT
GGAATTATAG AAAATTTTGA AGAGTTAAAA AAAGAATTAG AAAGTGATGG ATATGTTTTC
AAAAGTGAGA CAGATAGTGA AATAATTTCA AATTTACTCC AAAAACATCA CGACCAAACA
AAGAATGTCA AAGAAACAAT TCTAAAAACA GTTTCTCAAC TAAAAGGACA TTATTCATTT
GTTGCAATGT TTGAAGATGG GCAATTAGCA GCTGCAAGAT TTCATGAACC ATTAATTATT
GGAGTAGGAA AAGATGATTA CTTTTTGTCA AGTGATGTAC TAGGATTTAT TGAATTTACG
GATAATGCAA TCTATATGGA GAATGGAACT TTTGTAATAT TTGATAAAAA CAAATTCCAA
ATTTCAGATT TTAATGGAGA ACAAACAGGG TATGAAATTA CCAAAGTTTC AAAAGAATTT
GGAGATGCAT ACAAGGGAGA TTATGCACAT TTTACACTAA AAGAAATTTA CGAACAGCCT
GAGACAATTT TGAAGGCAGG AGAAAAGACA TCTAGTGAGA TAGAAGCAGC AACAGACTAT
ATCAGACAGG CAAAAAATAT CTACATTACT GGTAGTGGAA CAAGCTACAA TTCAGCACTA
ATTGCAAAGC AGATTTTGTC AAAATATGTC AAAATCAAGA CTGAGTCAAT CATGTCTAGT
GAGCTTCAGT TTGATCCAAA CATTATTGAA GAAAATTCCA TCCTAATTGC AATATCTCAG
AGTGGAGAGA GTGCAGACGT TTTAGAAGCA GTAAAAATTG CAAAAAATGC AAATTGTAAG
ATTATTGCAA TTGTTAATCT AGTGACATCT TCGCTTGCAC GAGAAGCAGA TGTTGTGATT
GGTTTGAATT GTGGTCCAGA GATTGGGGTT GCTGCAACTA AAAGTTTCAC ATCACAACTT
GTAATCTTGT ACAAAATTGT GCAAAAATTA AGCAATAATG ACATTACAAT TAATTTTGAA
GATTTCTCAA AGTCAATTTC AAAAACATTG GACAACCCAA CCAACATTCA AAAAATTGCA
AAAGAATTGA AAGAAATTTC AGACATTTAC ATTCTAGGTC GAGGAATCAA TTATCCAATT
GCAACAGAAT CTGCACTAAA ACTCAAAGAA CTGACATATA TTCATGCAGA AGGAATTGCA
GGTGGCGAAC TAAAACATGG ACCTCTTGCC TTAATGGATT CCAATGTATT TGTGATCATA
CTAAATCCAA ATGATTCAAC ATATTCAGAT ACTCTTACCA GTGCAAGAGA AATTAAAGCT
CGTGGTGCAA AAATTATTGG TGTGTCAGAT GTGAAAAGTG ATGTTTATGA TTATTGGATT
GAAATGCCAA AAATTAATGA AGTGTTATAT CCAATTTCAG AGATAATTCC AATTCAGTTG
TTGTCATATT ATGCAGCACT TGAAAAAGAC ACAGATCCTG ATTATCCAAG AAATCTTGCA
AAATCAGTTA CAGTCAAGTA A
 
Protein sequence
MCSIIGYYGK ETAAPIIVKG LKRMEYRGYD SVGVATESEN QIGLKKGTGK VQEVNSKVQL 
ETLPGRVGIG HTRWATHGKV TDVNAHPHPS NSGKIAIVHN GIIENFEELK KELESDGYVF
KSETDSEIIS NLLQKHHDQT KNVKETILKT VSQLKGHYSF VAMFEDGQLA AARFHEPLII
GVGKDDYFLS SDVLGFIEFT DNAIYMENGT FVIFDKNKFQ ISDFNGEQTG YEITKVSKEF
GDAYKGDYAH FTLKEIYEQP ETILKAGEKT SSEIEAATDY IRQAKNIYIT GSGTSYNSAL
IAKQILSKYV KIKTESIMSS ELQFDPNIIE ENSILIAISQ SGESADVLEA VKIAKNANCK
IIAIVNLVTS SLAREADVVI GLNCGPEIGV AATKSFTSQL VILYKIVQKL SNNDITINFE
DFSKSISKTL DNPTNIQKIA KELKEISDIY ILGRGINYPI ATESALKLKE LTYIHAEGIA
GGELKHGPLA LMDSNVFVII LNPNDSTYSD TLTSAREIKA RGAKIIGVSD VKSDVYDYWI
EMPKINEVLY PISEIIPIQL LSYYAALEKD TDPDYPRNLA KSVTVK