| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0316 |
|---|
| Symbol | rps2P |
|---|
| ID | 5774581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 279341 |
|---|
| End bp | 279964 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641315943 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_001581650 |
|---|
| Protein GI | 161527824 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01012] ribosomal protein Sa(cytosolic)/S2(archaeal) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC AAGCAGAAAC AACAGACATC AAAAAGAAGA TCCTATCTAC AGGAATCAGA
GTGGGTACAC AAGTTAAAAC AAAATTCATG AGACCATTCA TCACCAAGGC TAGCCCAGAA
GGACTTTACA TGCTTGATTT GGATATCACA CTGGACAAAA TTAAGACTGC TGCTAAATTC
ATCAACAGAT TAGGTGTAGA GAATCTTATT GTATGCTCAG GCAGACAATA TGCAGAAACA
CCAATTGAAA AATTCTGTGA AACATTAGGT TCAAAGAAAT TACTTGGAAG ATTTATGCCA
GGAACTCTAA CAAACCCATC ATTACCATAT TACATTGAAC CAAAATTGGT TTTAATTTCC
GATCCTCAAG TTGACGAACA AGCAATTACT GAAGCAACTA ATGCAGGCAT TCCAGTAATC
GGAATTGCAA ATACAGATAA TATTACATCA AATCTAGATG TAATCATACC AGCAAACAAC
AGAGGAAGAA AAGCGCTAGC TACAGTTTAC TGGTTATTGG TACGTCAAAT TCTCATTGAA
AAAGGAGAAC TAAAAGAAGA AGACCCAATG AATATTGAAA TTGATGATTT TGAAACAAAG
ATTACCGAAG AGGAAATCGA ATAA
|
|---|
| Protein sequence | MSQQAETTDI KKKILSTGIR VGTQVKTKFM RPFITKASPE GLYMLDLDIT LDKIKTAAKF
INRLGVENLI VCSGRQYAET PIEKFCETLG SKKLLGRFMP GTLTNPSLPY YIEPKLVLIS
DPQVDEQAIT EATNAGIPVI GIANTDNITS NLDVIIPANN RGRKALATVY WLLVRQILIE
KGELKEEDPM NIEIDDFETK ITEEEIE
|
|---|
| |