| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0275 |
|---|
| Symbol | |
|---|
| ID | 5774754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 243229 |
|---|
| End bp | 243693 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641315899 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001581609 |
|---|
| Protein GI | 161527783 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.000680057 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGA ATGTTGGAGA TACTGCTCCA AATTTTGAGC TTCCAGATAC AGAACTAAAA
TTGCGGACTT TGGATGAATT CAAAGGAAAA AAGATCGTTC TCACATTCAT TGTGGCAGCA
AGCTCTCCTG TTTGTGAGAC AGAATTGTGT ACACTTAGAG ATTCTTGGCA AGAAATTGCA
GATACAGGTG CACAAATAGT TGCAATTAGT AACGATGGAC CATTTGCAAA TAAAGCATTT
GCAGAAAAAC ACAACTTCAA TTTTCCATTG TTAGGGGATT ACAACAGCAA AACAATTAGC
GACTATGACA TTTTGATGAA AGACTTGCTT CACATCAAAG ACTACAACGC AGCAAAACGT
TCTGTATTTG TAATTATGGA AGACGGAAAA ATTGGTTACA AATGGGTTTC AGAAGATCCA
TTAAAAGAGC CAAACTATGA AGAGATTAAA AATTTCCTCA AGTAG
|
|---|
| Protein sequence | MSLNVGDTAP NFELPDTELK LRTLDEFKGK KIVLTFIVAA SSPVCETELC TLRDSWQEIA
DTGAQIVAIS NDGPFANKAF AEKHNFNFPL LGDYNSKTIS DYDILMKDLL HIKDYNAAKR
SVFVIMEDGK IGYKWVSEDP LKEPNYEEIK NFLK
|
|---|
| |