Gene Nmar_0274 details

Gene Information

• Locus tag: Nmar_0274
• ID: 5774057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 242700
• End bp: 243212
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641315898
• Product: biotin/lipoyl attachment domain-containing protein
• Protein accession: YP_001581608
• Protein GI: 161527782
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.000653731
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGACTATA AGATAGCTGA TGTTGAAAAA TCATTTGAAG GAAAAATTAC TGAAAACTTA 
GGTAATAATG ATTATGTGAT TAAGATCAAT GACAAAGAAC ATCAATTGAA AATCCTTAGC 
ATGAATGCAA AAGGTATAGA ATTCATTTTA GATCAACAAT ATCATAAAGC AAAATATCTT 
GAGACTGCAA CTAATGAAAT GAATCTTGTA ATTGATAATG TTCCAGTTAC ATTAAACATG 
AATACTCACT TTGACGAAAT AGTTTACAAA AACTCTGGCG GTGGTGGCGC AGGTGGTGCT 
CAAGTAGCAC TCAAAAGTCA AATCCCTGGT AAAGTTGTGT CAATTGCAGT TGCTGAAGGT 
GACTCTGTCA AGAAAGGTGA TGTAGTTTGT ACTTTAGAAT CAATGAAGAT GCAAGTTGGA 
ATAAAGGCAC ACAAAGATGG TGAAGTTAAA AATCTCAAAA TTAAAGAAGG TGCAACTGTC 
GCAAAAGGCG ACGTTATTGC AGATTTAGAA TAA 

 

Protein sequence

MDYKIADVEK SFEGKITENL GNNDYVIKIN DKEHQLKILS MNAKGIEFIL DQQYHKAKYL 
ETATNEMNLV IDNVPVTLNM NTHFDEIVYK NSGGGGAGGA QVALKSQIPG KVVSIAVAEG 
DSVKKGDVVC TLESMKMQVG IKAHKDGEVK NLKIKEGATV AKGDVIADLE