Gene Nmar_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0272 
Symbol 
ID5774035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp239653 
End bp241200 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content36% 
IMG OID641315896 
Productcarboxyl transferase 
Protein accessionYP_001581606 
Protein GI161527780 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00889461 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTCTG AAAAACTCGA AAATTATAAC AACAAACACA AAACTTCTCA ACAAGGCGGT 
GGTCAGGATA GGATCAAAGC CCAGCATGAT AAAGGCAAAT TAACTGCCCG AGAAAGAATC
GATCTTCTAT TAGATGAGGG TAGTTTTACC GAAATCGACC CAATGGTAAC TCATCATTAT
CATGAATATG ATATGCAGAA AAAGAAGTTC TTTACTGATG GTGTAGTTGG TGGTTATGGA
AATGTCAACG GTAGACAAAT CTTCGTATTT GCTTATGATT TCACTGTTCT TGGTGGAACT
CTAAGTCAAA TGGGTGCCAA AAAAATTACT AAATTAATGG ATCATGCAGT TAGAACTGGA
TGTCCAGTTA TCGGAATCAT GGATTCTGGT GGTGCAAGAA TTCAAGAAGG AATAATGAGT
CTTGATGGAT TTGCAGATAT TTTTTATCAT AATCAATTAG CTTCAGGAGT TGTTCCTCAA
ATTACAGCAA GTATTGGTCC TTCTGCAGGT GGCTCAGTGT ATTCACCAGC TATGACAGAC
TTTGTCGTAA TGGTGGAAAA GGCAGGATCA ATGTTTGTTA CTGGTCCTGA TGTTGTAAAG
ACAGTTTTGG GTGAAGAAAT TTCAATGGAT GATCTTGGTG GAGCTATGAC ACATGGTTCA
AAAAGTGGAG TTGCACATTT TGTTGCACAA AACGAATACG AATGTATGGA TTACATCAAA
AAATTAATCT CTTACATACC ACAAAATAAT TCTGAAGAAC CACCAAAAAT AAAAACCGAT
GATGATCCAA ACAGATTAGA TAATAATCTC ATTAATGTTA TCCCAGAAAA TCCATTACAA
CCTTATGATA TGAAAGAAAT TATCAATTCT ATTGTAGATA ATCATGAGTT CTTTGAAGTT
CATGAATTAT TTGCACCAAA TATTGTCGTA GGTTATGCTA GAATGGATGG TCAAGTAGTT
GGAATAATTG CAAACAATCC AATGCATTTA GCAGGAGCAC TTGACATTGA TTCATCAAAT
AAATCTGCAC GTTTCATTAG ATTCTGTGAT GCATTTAACA TTCCCATTAT CACTTTAGTA
GATACACCAG GTTACATGCC AGGTTCTAAT CAAGAACACA ACGGTATCAT TAGACATGGT
AGTAAATTGC TCTATGCATA CTGTGAAGCA ACCGTTCCAA GAATTACACT TGTAATTGGA
AAGGCATATG GTGGCGCATA CATTGCAATG GGAAGTAAGA ACCTTCGAAC TGACATTAAT
TATGCATGGC CAACTGCACG TTGTGCTGTA CTAGGTGGTG AAGCTGCTGT AAAAATCATG
AACAGAAAAG ATTTGGCAGA CGCAGATAAT CCTGAAGAAC TTAAGAAGAA ATTGATTGAT
GAGTTTACAG AAAAATTCGA AAACCCATAC GTTGCAGCAT CACACGGAAC AGTTGATAAT
GTAATTGATC CCGCAGAAAC AAGACCTATG TTGATTAAAG CCCTCAAAAT GCTTGCAAAC
AAAAGAGAAA AACAACTTCC TAGAAAACAT GGAAATATCA ATTTGTGA
 
Protein sequence
MHSEKLENYN NKHKTSQQGG GQDRIKAQHD KGKLTARERI DLLLDEGSFT EIDPMVTHHY 
HEYDMQKKKF FTDGVVGGYG NVNGRQIFVF AYDFTVLGGT LSQMGAKKIT KLMDHAVRTG
CPVIGIMDSG GARIQEGIMS LDGFADIFYH NQLASGVVPQ ITASIGPSAG GSVYSPAMTD
FVVMVEKAGS MFVTGPDVVK TVLGEEISMD DLGGAMTHGS KSGVAHFVAQ NEYECMDYIK
KLISYIPQNN SEEPPKIKTD DDPNRLDNNL INVIPENPLQ PYDMKEIINS IVDNHEFFEV
HELFAPNIVV GYARMDGQVV GIIANNPMHL AGALDIDSSN KSARFIRFCD AFNIPIITLV
DTPGYMPGSN QEHNGIIRHG SKLLYAYCEA TVPRITLVIG KAYGGAYIAM GSKNLRTDIN
YAWPTARCAV LGGEAAVKIM NRKDLADADN PEELKKKLID EFTEKFENPY VAASHGTVDN
VIDPAETRPM LIKALKMLAN KREKQLPRKH GNINL