Gene Nmar_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0263 
Symbol 
ID5773991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp231236 
End bp232693 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content32% 
IMG OID641315886 
Productargininosuccinate lyase 
Protein accessionYP_001581597 
Protein GI161527771 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0999182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGTT CACGTCTTGG AAATGATTTG AGTGATATTA CTTTAGATTA TGTTTCATCC 
ATTGATGATG ATGCTGCAAT CACTTTTTAT GATATTGTTG GAAGTCAAGC TCATGTTTTG
ATGTTATATC AACAAAAAAT AATCACAAAA AGTGATGCAA AGAAGATTCT TTCTTCTTTG
GAGAGCTTGA AAGATGAAAC ATTTGATTCA TCATCTGGTG CTGAAGATAT TCATGAATTA
ATTGAAGCAC TAGTAATCAA AAGGGCTGGA ATGTCCAGTG GAGGTAAAAT GCACACTGCA
CGTTCAAGAA ATGATCAAGT TGTTTTAGAT ATTAGAATGA AAATTAGAGA TGATATCAAT
ATTATCTGTA ATTGTCTTTT AGATACTATT GAAGCACTAG TTTCTGTGGC TAAAAATCAC
CAAAAAACAA TCATGCCACT TTATACTCAT CTTCAACAAG CTCAAGCTGG TTTATTCTCT
CATTATCTTC TTGCACATGC AGATGTTTTA TCAAGAGATT TCCAAAGACT CTATGGAACA
TTTGAAAGAA TTAATCAAAG TCCATTAGGT GCAGGACCTG TTGGCGGAAC AAGTATTTCA
ATTGATAGAC GCAGCACTGC AAAGATGTTA GGTTTTGATG ATGTAGTTGA AAATTCAATT
GATGCAACTA GCACACGTGA CTTTGTAGCA GAGTATGTCT CAATGGTCTC AATTTTAATG
ACTAATCTTA GTAAAATTGC TGAAGATTTT GTAATTTGGT CTACTTCTGA ATTTTCTTTT
ATTGAATTAT CTGATGAATT TACATCACCA TCAAGTGTAA TGCCACAAAA GAAAAACCCT
GACATCTTAG AGCTAACTCG TGGAAAAACA TCTGAAGTTA TTGGAAATCT TACTGCAATT
TTAACTACTG TTAAAGGACT GGCCTCTGGT TATGGACGTG ATTTACAACA GATAAAATCT
TCAATTTGGT CTACCTCAAA GATTTCAATC AGTGCTCTTT TAATTTTCAA ATCAATGCTT
CTTACTTTGA AAGTAAATGA AAAACAAATG AAAAAAGTAA CAGAATCTAG TAATCTCATT
GCTTTAGATA TTGCAGAAAA ATTAGTTCAA GAAGGAATTC CATTCCGTGT AACTCATAAA
ATTGCTGGCT CTTTAACCCA ATTGGCACAT TTATCAAAAA AACCGATTTC AAAACTTACT
CCATCTGATA TCAAAAAATC TGTGGCTGAC ACCAAAGTTG ATCCTAAACT CGTCTTAGAA
ATTATTTCTT CTATAACTGT GGTATCCTCT TTAAAGGAGA GAAAATCATA TGGTTCTTCA
GGATACGATG AACAAAAACG AATGATTTCA GATAGACTCA AAAAAATTAA TGATTTTAGA
ACTGATCTTA CTCATAGAGA AAACAAAATC AATTCTTCTC TTGAAGATTT GAAAAAACAA
ATTGATGAAA TTATTTAA
 
Protein sequence
MYRSRLGNDL SDITLDYVSS IDDDAAITFY DIVGSQAHVL MLYQQKIITK SDAKKILSSL 
ESLKDETFDS SSGAEDIHEL IEALVIKRAG MSSGGKMHTA RSRNDQVVLD IRMKIRDDIN
IICNCLLDTI EALVSVAKNH QKTIMPLYTH LQQAQAGLFS HYLLAHADVL SRDFQRLYGT
FERINQSPLG AGPVGGTSIS IDRRSTAKML GFDDVVENSI DATSTRDFVA EYVSMVSILM
TNLSKIAEDF VIWSTSEFSF IELSDEFTSP SSVMPQKKNP DILELTRGKT SEVIGNLTAI
LTTVKGLASG YGRDLQQIKS SIWSTSKISI SALLIFKSML LTLKVNEKQM KKVTESSNLI
ALDIAEKLVQ EGIPFRVTHK IAGSLTQLAH LSKKPISKLT PSDIKKSVAD TKVDPKLVLE
IISSITVVSS LKERKSYGSS GYDEQKRMIS DRLKKINDFR TDLTHRENKI NSSLEDLKKQ
IDEII