Gene Nmar_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0261 
Symbol 
ID5774044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp230117 
End bp230866 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content36% 
IMG OID641315884 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_001581595 
Protein GI161527769 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.234537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAG TTTCTAGTAT TGCAGATGAC CAATCTTCTC AATCAATCAC ACTTAGAATT 
GCAAGATACA ATCCTGAAAA AGACAGTGAA CGACAATTCA TGGAATTCAC TGTTCCCTAT
GAAAAGTGGA CTACTGTACT TGAAGCAATT CTTGATGTAA AGAAACACTT TGATCATTCT
GTTGCAGTTC GTTATTCATG CAGACAAGCA ACATGTGGTT CATGTGGAAT GATAATTAAT
GGAAAACCAA GACTAGCATG CTTTACAAAA ATTAGTGAAC TTGATTCAAA TATTGTAACT
GTAGAACCAA TGAACAACTT CCCAATTATT CGTGACTTGG CTGTTAAGTT TGAAAGACTA
TTTGACACTC ATCATAAAAT CAAACCTTAT CTTGATAGGG ATGATACTGA ATTAGAATCT
GATGCAAAAG AATTCTTGCA ATCTCCAGAA GAATTAGAAC AATACATCCA ATTTGCAAAT
TGTATCAAAT GTGGATTGTG TAATTCTGCA TGTCCTACTA TGGCTACTGA TTCTTCATTT
GTAGGTCCAC AAGCACTTGC TCAAGCCTAT CGTTATGTGG CAGATAGTAG AGACAAAGGA
AAAGATTCTA GACTAAAAAT CATTGATGAA TCTCACGGAA TTTGGAGATG TCATTTCGCA
GGCTCTTGTA GTCAGGTGTG TCCAAAAGGT GTTGACCCTG CAATGGGAAT TCAACTTCTT
AGAGGATATA TGCTTGGTTT TAGAAGTTAA
 
Protein sequence
MAQVSSIADD QSSQSITLRI ARYNPEKDSE RQFMEFTVPY EKWTTVLEAI LDVKKHFDHS 
VAVRYSCRQA TCGSCGMIIN GKPRLACFTK ISELDSNIVT VEPMNNFPII RDLAVKFERL
FDTHHKIKPY LDRDDTELES DAKEFLQSPE ELEQYIQFAN CIKCGLCNSA CPTMATDSSF
VGPQALAQAY RYVADSRDKG KDSRLKIIDE SHGIWRCHFA GSCSQVCPKG VDPAMGIQLL
RGYMLGFRS