Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0261 |
Symbol | |
ID | 5774044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 230117 |
End bp | 230866 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641315884 |
Product | succinate dehydrogenase and fumarate reductase iron-sulfur protein |
Protein accession | YP_001581595 |
Protein GI | 161527769 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.234537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAG TTTCTAGTAT TGCAGATGAC CAATCTTCTC AATCAATCAC ACTTAGAATT GCAAGATACA ATCCTGAAAA AGACAGTGAA CGACAATTCA TGGAATTCAC TGTTCCCTAT GAAAAGTGGA CTACTGTACT TGAAGCAATT CTTGATGTAA AGAAACACTT TGATCATTCT GTTGCAGTTC GTTATTCATG CAGACAAGCA ACATGTGGTT CATGTGGAAT GATAATTAAT GGAAAACCAA GACTAGCATG CTTTACAAAA ATTAGTGAAC TTGATTCAAA TATTGTAACT GTAGAACCAA TGAACAACTT CCCAATTATT CGTGACTTGG CTGTTAAGTT TGAAAGACTA TTTGACACTC ATCATAAAAT CAAACCTTAT CTTGATAGGG ATGATACTGA ATTAGAATCT GATGCAAAAG AATTCTTGCA ATCTCCAGAA GAATTAGAAC AATACATCCA ATTTGCAAAT TGTATCAAAT GTGGATTGTG TAATTCTGCA TGTCCTACTA TGGCTACTGA TTCTTCATTT GTAGGTCCAC AAGCACTTGC TCAAGCCTAT CGTTATGTGG CAGATAGTAG AGACAAAGGA AAAGATTCTA GACTAAAAAT CATTGATGAA TCTCACGGAA TTTGGAGATG TCATTTCGCA GGCTCTTGTA GTCAGGTGTG TCCAAAAGGT GTTGACCCTG CAATGGGAAT TCAACTTCTT AGAGGATATA TGCTTGGTTT TAGAAGTTAA
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Protein sequence | MAQVSSIADD QSSQSITLRI ARYNPEKDSE RQFMEFTVPY EKWTTVLEAI LDVKKHFDHS VAVRYSCRQA TCGSCGMIIN GKPRLACFTK ISELDSNIVT VEPMNNFPII RDLAVKFERL FDTHHKIKPY LDRDDTELES DAKEFLQSPE ELEQYIQFAN CIKCGLCNSA CPTMATDSSF VGPQALAQAY RYVADSRDKG KDSRLKIIDE SHGIWRCHFA GSCSQVCPKG VDPAMGIQLL RGYMLGFRS
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