Gene Nmar_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0250 
Symbol 
ID5773542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp221922 
End bp222851 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content34% 
IMG OID641315872 
ProductABC-type phosphate/phosphonate transport system periplasmic component-like protein 
Protein accessionYP_001581584 
Protein GI161527758 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTC CAATAATTTT AGCAGTAATA GTGGTTGGAA TTATTTCAGT TGCAGCGGTT 
TTTTCTTTAG AATCAGGTGA AATGACAAAT TCTGATGAAA TAACAGTTCA AGACGATACC 
ATTTTGCAGG ATTTGCCACT TGAATTTGAT GAAACAATCA CGATTGGAAC AATTCATAGA 
GATTCAGTAA AAATGACAAA AAGATATCAG CCATTAGCAG ATTATGTGGC TGAAAAACTA 
AGTGATGAGA ATACCACATA CAAGGGAGTT GTGAGAATTA TTGGAACCGA AGAAGGGATG 
ATAAACAGTG TAATCAATAA AGAAATGGAC ATTTTCTTTG ATAGTCCTCT AATTGGAATG 
AAAGTAGCAG AACAAGCTGA CATGAATCCA TTGTTGTTGT CATGGAAAGA AGGGTATAGA 
GAATACCACT CTGTATTCAT AGTGCCAATA GAATCAGAGA TTACTTTTGA TGATCTGAAT 
GGAAAAACCA TTGTTTTTGA GGATACAGAA TCTACATCTG GGTATTTGTT GCCACTAACG 
CACCTTCAAA ATGCAGGTTA TGTGGCAGAT GCCTCATCAG AAAACATCAC ACCTGTATTT 
AGCTTAGATG ATGAAAATAC TCCAATATGG CTTCTAGAAG GCAGAGGGGA TGTTGGTGCC 
ACATCTAATT TAGATTTTGA AGACATACCA ACCAACATTA AAGAAAAAGT AAAAGTGATT 
GAAAAAACTG GTTCCATACC TAGACAGATG GTTTTTGTTG GAAATCATAT TGAAGATCAA 
GAAAATCTGA AAACAATCTT GTTGGAAATG AATGAAACTC CTGAAGCACT TGAGATTCTT 
GGAAAAATTT CACGCACATC ACAATTTTCT GAAATAGATT TGGAAAAAGA TCTAGAACAA 
GTTAGAAAAA TATTGGAATC ATTGAGATAA
 
Protein sequence
MKIPIILAVI VVGIISVAAV FSLESGEMTN SDEITVQDDT ILQDLPLEFD ETITIGTIHR 
DSVKMTKRYQ PLADYVAEKL SDENTTYKGV VRIIGTEEGM INSVINKEMD IFFDSPLIGM 
KVAEQADMNP LLLSWKEGYR EYHSVFIVPI ESEITFDDLN GKTIVFEDTE STSGYLLPLT 
HLQNAGYVAD ASSENITPVF SLDDENTPIW LLEGRGDVGA TSNLDFEDIP TNIKEKVKVI 
EKTGSIPRQM VFVGNHIEDQ ENLKTILLEM NETPEALEIL GKISRTSQFS EIDLEKDLEQ 
VRKILESLR