| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0248 |
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| Symbol | |
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| ID | 5773978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 219583 |
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| End bp | 220500 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641315870 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001581582 |
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| Protein GI | 161527756 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTTC CACTTTCAAA ATATGTTTGG TTTGATGGAA AATATGTTCT AACAGAAAAA
GCACAAGTTC CAATCACAAC ACATGCAATA CATTATGGAA CATCTATCTT TGAGGGAATT
AGAGCATATT GGAATGGAAA AAATCTTCAT GTGTTTAGAT TAGATGAACA TGTAAAACGA
TTTAGAAGAT CAGGACAGTT TTACAATATT TCATTAAACT TTTCAGACAA AGAAATTACA
GAAGCAATAA TTGGAATATG CAAAAAAAAT AAAATCAAAA AATCATGTTA TATTAGACCA
TTTTATTTTG TAGGAGATTA CGGAATAAAT CTTCACGTTA CTGAAAAAGC TCCAACAAAT
GTTGCAATGT TTACGTTTCC TTTTGGGGAT TTATTTAACA AGAATGGTAT CTCTGCAGGA
ATTGTCTCAT GGAGAAAATT CTCAGACATG TCAACTCCGC CTCAAGCAAA GATGGGTGGA
AATTATCTAA ATTCAATCAT TGCAACACAA GAAGCAAAAA GAAACGGAGT AGATGAAGCA
ATATTACTTG ATCATAACGG AAATGTAAGT GAAGCACCTG GTGAGAATAT CTTTATTGTT
AGAGAGGGTC AGATGGCAAC ACCATCATTA GCATCAGCTG CACTAGAAGG AATTACTCGC
GATGCAGTTA TTAAAATTGC AAGAGATCTG GATATTGAAA TAGTTGAAAG AGACATTACA
CGTAGTGAGC TTGCAATGTC TGATGAGGTA TTTTTAACAG GAACTGCAGC TGAGATCACA
CCCATAATTT CACTTGATGG AAAGAAAGTC AGTAATGGCA AACCTGGAGA CATTACAAAG
AAGATGATGG AAGAATATAC AGACATTGTA ATGAACAAAA ATGACGACTA TTCTCATTGG
TTAACTGCGG TGTATTAG
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| Protein sequence | MKLPLSKYVW FDGKYVLTEK AQVPITTHAI HYGTSIFEGI RAYWNGKNLH VFRLDEHVKR
FRRSGQFYNI SLNFSDKEIT EAIIGICKKN KIKKSCYIRP FYFVGDYGIN LHVTEKAPTN
VAMFTFPFGD LFNKNGISAG IVSWRKFSDM STPPQAKMGG NYLNSIIATQ EAKRNGVDEA
ILLDHNGNVS EAPGENIFIV REGQMATPSL ASAALEGITR DAVIKIARDL DIEIVERDIT
RSELAMSDEV FLTGTAAEIT PIISLDGKKV SNGKPGDITK KMMEEYTDIV MNKNDDYSHW
LTAVY
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