Gene Nmar_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0239 
Symbol 
ID5773322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp210113 
End bp210649 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content40% 
IMG OID641315860 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001581573 
Protein GI161527747 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATAG ATGAGAAATT TGTTGAAAAT CTAGAAGTCA CTGGAAAGAC ATTGCACTCA 
GATGGTGAAA ATAAACACTT CATCTGGGGT AGCGGCAGAA CTGATGGTGA GGCATTTTCA
AACGATGATG TCAAAGCAGC ATATGAAGCA AGAGGAGAAG AACAAGTTCC TCTTGGAATT
CACGGTACAA CTGTAGCAGT TGACTGGGAT TCTTGTGTTG CAGCAGGTTC TTGTATGAGT
GTCTGTCCTG TTCAAACCTT CCAATGGTAT AGAACTGAAA AAGATATCCC AGCAAAAGAT
GTCAATGGTG CAACTTTTGA CGGAACTGGT TTAACTGAAC AAGATGAACG TCTAGATTAT
ACAGATAAAT CACAACCAAT CAGAGAACAC GATTGTACAC AATGTATGGC TTGCCAAGAA
GCATGTCCAA CACACGCAAT CTTGATTGAA CCATCTTACC AAGAGTATCA CGAAAAAGCT
GATGGCTCTT ATGTAAAAAT GGAATCAAGC TCTGTAAATC CACACGCACA CGATTAA
 
Protein sequence
MPIDEKFVEN LEVTGKTLHS DGENKHFIWG SGRTDGEAFS NDDVKAAYEA RGEEQVPLGI 
HGTTVAVDWD SCVAAGSCMS VCPVQTFQWY RTEKDIPAKD VNGATFDGTG LTEQDERLDY
TDKSQPIREH DCTQCMACQE ACPTHAILIE PSYQEYHEKA DGSYVKMESS SVNPHAHD