Gene Nmar_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0232 
Symbol 
ID5773618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp205565 
End bp205981 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content30% 
IMG OID641315853 
Producthypothetical protein 
Protein accessionYP_001581566 
Protein GI161527740 
COG category[S] Function unknown 
COG ID[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTACA AGTTTGTAGA CCATGCAACA GATGCAATCA TTGAAGTTAC AGCAAAAGAT 
CTTCAAGAAG CATTTTCAGT AACAGCTGAT GCTGTAATTA ATTTAACACT TGATCAAGAC
AAAGTAGAAG AGAAAGAACA AAGAAAATTT GTTGCAGAAG GAAAAGACTT GAGATATTTG
TTATTTAGTT GGTTAGAAGA AATTCCTTTT TTGTTAATTA CAGAAGGATT TGCAATTAAA
AGAATAGAAT TTGATATAAC TCAAAACCAA GATTATAAAA TAAATGCAAC AGCATATGGT
GAACCGCTTG ATTTTAAAAA ACACAATTTC AAAGTGGAAA TAAAGGCTCC AACATTTTAT
GACATGGAAA TCAAACAAAA TGGAGGGGTG TTTATGAGAT TTTTGCTTGA TTTGTAA
 
Protein sequence
MSYKFVDHAT DAIIEVTAKD LQEAFSVTAD AVINLTLDQD KVEEKEQRKF VAEGKDLRYL 
LFSWLEEIPF LLITEGFAIK RIEFDITQNQ DYKINATAYG EPLDFKKHNF KVEIKAPTFY
DMEIKQNGGV FMRFLLDL