Gene Nmar_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0221 
Symbol 
ID5774606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp196736 
End bp196972 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content39% 
IMG OID641315841 
Productlike-Sm ribonucleoprotein core 
Protein accessionYP_001581555 
Protein GI161527729 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTG ATATGGCAGT AAAAGTACTG GATGAGAGTA TCAATCAAAT TGTATTGATA 
AAACTCAAAG GAAACAAAAC CATTAGAGGT AATTTACTCG GTTTTGACCA ACACATGAAC
CTGCTACTTG ATTCTTCAGA GGAAATTCCT GCTGAAGGCG AGGCAAAAGG CCTTGGTTCC
ATTGTAGTTA GAGGAGACAA TGTAGTTATG ATTTCTCCTC CACCAGCACA AAATTAG
 
Protein sequence
MSVDMAVKVL DESINQIVLI KLKGNKTIRG NLLGFDQHMN LLLDSSEEIP AEGEAKGLGS 
IVVRGDNVVM ISPPPAQN