Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0215 |
Symbol | |
ID | 5774565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 192117 |
End bp | 192944 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641315835 |
Product | hypothetical protein |
Protein accession | YP_001581549 |
Protein GI | 161527723 |
COG category | [R] General function prediction only |
COG ID | [COG1355] Predicted dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAGAA AACCAGTTGT TGCCGGTCAA TTTTACCCTG GAACAAAAAA TGAACTTGAA GAAATGATTA ATTCTTGTAT TCAGCACAAA TTTGGACCTG GCAATCAAAT ACAAAATAAT GAAGGAATTT ACGGAGTAAT TTCACCTCAT GCAGGCTATG TTTATTCGGG ACCTACGGCA TGTTATTCTT ACAAGGCAAT TTCGTCTAAA AATCCGGAAC TAGTAATCAT TCTTGGACCT AATCATTTTG GAGTTGGAAA AGATGTTGCT ACAATGGTTA ATGCTCAATG GGAAACACCA CTAGGATTGG TAGATGTGGA TTCAGAGGCT GCAAAAGAGA TAGCAAATAA TTCAAAATAC ATAGAGATTG ATGAGTTTTC TCATTCAAGA GATCATAGTC TAGAAGTTCA AATTCCTATG TTGCAATCAA TCTTTTCTGA AAAATTCAAA ATCCTTCCAA TAATTTTACG CGATCAAAGT TTAGAAATGG CAAAAGATGT GGGAAATGCA GTAGCACAAA TTGCAAAATC AAGAAATACA ATGATTGTTG CATCATCTGA TTTTACACAT TATGAAGAAA ATTCTTTTGC ACATTCTCAA GATAAAGCAT TGATTGAGCC AATATTAGAA ATGGATGTTG AAAAATTCTA TAGTGTTTTA ATGGAAAAAA GAGTAACTGC ATGTGGTTAT GGAGCTATGG CATCAGTGAT GATTGCATGT AAAAATTTAG GTGCGGTTAA AGGAGAATTA CTAAGTTACA CTACAAGTGG AGATGTTATG GGAGATACAT CATCTGTTGT TGGGTATGGT GCGATTAAAT TTATTTAA
|
Protein sequence | MIRKPVVAGQ FYPGTKNELE EMINSCIQHK FGPGNQIQNN EGIYGVISPH AGYVYSGPTA CYSYKAISSK NPELVIILGP NHFGVGKDVA TMVNAQWETP LGLVDVDSEA AKEIANNSKY IEIDEFSHSR DHSLEVQIPM LQSIFSEKFK ILPIILRDQS LEMAKDVGNA VAQIAKSRNT MIVASSDFTH YEENSFAHSQ DKALIEPILE MDVEKFYSVL MEKRVTACGY GAMASVMIAC KNLGAVKGEL LSYTTSGDVM GDTSSVVGYG AIKFI
|
| |