| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0214 |
|---|
| Symbol | |
|---|
| ID | 5774542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 190720 |
|---|
| End bp | 192114 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641315834 |
|---|
| Product | dihydropyrimidinase |
|---|
| Protein accession | YP_001581548 |
|---|
| Protein GI | 161527722 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTATG ATGCTGTAAT TGTTGATTCA CACGTTATAC TCCCGCAAGG AATGGTGGAT
AAAAACATCG TAATTGATGA TGGAAAAGTA GTTAGCCTCA CAAATGATGT TCCTGCATGT
GATAACAAAA TCAATGGAAA TGGACTGATT TCTGTTCCTG GTCCAATTGA TACACATGTT
CACTATGGTG TTTATTCTCC AATCAACGAG GCAGCAAAGA CAGAATCTCA TGCTGCTGCA
ATTGGTGGTG TTACAACTAT GATGAGGATG CTTAGATTGG GAGACCCATT TTCTAATTCA
CTCCAAGATC AATTAGATGC TGCATCTCAA AATCATTATG TTGACTATGC AATACATGCA
TCTGTTTTTA CTCCTCAACA AATTAATGAA ATGGATTACT GTGTGAAAAA AGGAATTACC
TCATTCAAAA TTTACATGAA TCTTGGCGGC GAAATTGGTC ATGTTTACAT GGATATGCCA
CCAAATTCTT CTAAACTTGT TGCAGCTAAC GTTGATGTAA CTGATGAGAT TGTTGAGCAG
ACTGTAAAAA CTGCAGCTTC TCTTGGATGT CCTGTTTTGG TTCATGCAGA AGATTATGAA
TCCTGTGGAT GTGGAATTCA AACTGCACGA GAGAAAAACC AAGATGGATT GTCTGCATGG
TCTGAAAGTC GTTCCCCTGA ATTTGAAGCA AAAGCCATCA AAACTGTTTC AAAGTTTGGA
CGCGATTATG ATTGTGTTAT CTATTTTGTT CATATTGGTT CAGAACAAGC TCTAAAACAA
ATTCAAGAAG AAAAAAAACT AGGAACAAAG ATTTTTGTCG AAACATGTCC TCACTATTTG
ACATTATCTT ATGAAAAACA AAATGGCTAT CTTGCTAAAG TAATGCCTCC AATACGAACA
GAAACTGACC GACAAGCAGT ATGGGGTGCA CTTTCTTCAA ATCAAATTGA TACTATAGGC
ACTGATCATG TTGCAAATCA ACTCAAACTC AAATTGGGTG GAGATGATGT ATGGTCTGCA
TTAGCTGGAT TTCCAGGAAT AGGAACTGTA CTTCCTATTG TACTCAATGA TGGAGTAAAC
CAGAATAAAA TTACTTTAGA GCAATTTGTG CGCTTTACAA GCCAAAATGC CGCACAAATA
TTTGGAATGT ATCCTCAAAA AGGTACTCTT GAAAAGAATT CTGATGCTGA TGTTACTATG
ATTGATCTGA AAAAAGAAAA GAAAGTAACA TCTGAATTAT TTGGTGGGTT TTCAGATTAC
ATCGTTTATG AAGGTAGAAA TTTGAAAGGC TGGCCTGTTA AAACAATAGT ACGAGGAGAA
TTAATTGCTG AAGACTTTGA AGTTATTGGA AAACTTGGTC ATGGGAAACT TGTTCCACGA
GCAATTCCTA AATAA
|
|---|
| Protein sequence | MTYDAVIVDS HVILPQGMVD KNIVIDDGKV VSLTNDVPAC DNKINGNGLI SVPGPIDTHV
HYGVYSPINE AAKTESHAAA IGGVTTMMRM LRLGDPFSNS LQDQLDAASQ NHYVDYAIHA
SVFTPQQINE MDYCVKKGIT SFKIYMNLGG EIGHVYMDMP PNSSKLVAAN VDVTDEIVEQ
TVKTAASLGC PVLVHAEDYE SCGCGIQTAR EKNQDGLSAW SESRSPEFEA KAIKTVSKFG
RDYDCVIYFV HIGSEQALKQ IQEEKKLGTK IFVETCPHYL TLSYEKQNGY LAKVMPPIRT
ETDRQAVWGA LSSNQIDTIG TDHVANQLKL KLGGDDVWSA LAGFPGIGTV LPIVLNDGVN
QNKITLEQFV RFTSQNAAQI FGMYPQKGTL EKNSDADVTM IDLKKEKKVT SELFGGFSDY
IVYEGRNLKG WPVKTIVRGE LIAEDFEVIG KLGHGKLVPR AIPK
|
|---|
| |