| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0208 |
|---|
| Symbol | |
|---|
| ID | 5773817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 186634 |
|---|
| End bp | 187344 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641315827 |
|---|
| Product | peptidase S26B, signal peptidase |
|---|
| Protein accession | YP_001581542 |
|---|
| Protein GI | 161527716 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02228] signal peptidase I, archaeal type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGAAAAA AGTCTATTTC AAAAGGAGTT ATCAAAGATA TTATTATTGT TGCCGTTGGT
GTTTTGGTAA TTTGGATTGG TCTTCAAATT GCATTTGGAA CGCCTAATCC ATTTTATGTG
GTTGCAAGTG GAAGTATGAT TCCAGCTTTA GAAGTTTATG ATGTCTTGAT GGTTTCAGGA
CATGAGCCGT TTAATGAGTT AGAAGTGGGA GACATTATCG TGTTTGATCG TCCTTCTGAT
CATAATAGAG TAATTGTGCA TAGAGTTGCG TCAATCTTAG ATGAAGATCC TCGAACAATT
AGAACAAAAG GAGATGCAAA TCCAGCTTCA ATTCCAGGTA CAGACTTTCC AATTACTGAA
GAAGAATACA TTGGAAAAGT AGCATATACA CTTCCACAAG TAGGATATGT TACACAATTA
CTAAAACCAC CAATCAACTA TGTCATAATT GCAATTGTAA TTGGAATAAT GATATTCAAA
CAATTTGCAA AAAGAAAAGA GGAAAAAGAA TTACCATTTG AAGATCCAAT GGATTCAGAA
AATCCTGACA CAATTGAAGA ATTGTCAGAC ATTGACAAGA TTGAGGAGGA CACAGAGTAT
TCAGAATCTA CTGAATTAAA CAATGTTGAA AAAAATGACG AATCGACTGA GACAAAATCA
GACGATCCTA CAGAACATAG TGAAGAATCT AAAGAAGAAA AGAAAGAGTA G
|
|---|
| Protein sequence | MGKKSISKGV IKDIIIVAVG VLVIWIGLQI AFGTPNPFYV VASGSMIPAL EVYDVLMVSG
HEPFNELEVG DIIVFDRPSD HNRVIVHRVA SILDEDPRTI RTKGDANPAS IPGTDFPITE
EEYIGKVAYT LPQVGYVTQL LKPPINYVII AIVIGIMIFK QFAKRKEEKE LPFEDPMDSE
NPDTIEELSD IDKIEEDTEY SESTELNNVE KNDESTETKS DDPTEHSEES KEEKKE
|
|---|
| |