Gene Nmar_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0206 
Symbol 
ID5773751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp182783 
End bp184879 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content35% 
IMG OID641315825 
ProductCoA-binding domain-containing protein 
Protein accessionYP_001581540 
Protein GI161527714 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID[TIGR02717] acetyl coenzyme A synthetase (ADP forming), alpha domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT CTCCTATTTT ATCACCAAAA TCAATTGCAG TAATTGGTGC ATCTGATAAG 
AGAGGAAGTG TTGGTGCTAC TATTACATCA AATATTATGA ATGGTTTCAA GGGAACAGTA
TACCCTATTA GTCCTACAAG AGACACTGTA TTTTACAAAA AAGCATACAA GAGTGTTTTA
GATGTTCCAA AATCAATTGA TCTTGCAGTT ATTGTTATCA AAAATACACT TGTTACTCCT
GTTTTAGAAG AATGTGGAAA GAAGAAAATC AAAGGCGTAA TTATCATAAC AGCTGGTTTC
AAAGAAGTAG ATGAAGAAGG AGCGAAAAGA GAACAACAAG TCATAGACAT TGCAAAAAAA
TACAACATGC AAGTTGTTGG ACCTAATTGC CTTGGTGTCA TGAATCTTGA TTCAAAAACA
ATGATGAATT CTACTTTTCT TAAAGTTACA CCAAAGTCTG GAAAAATTGC ACTTGTTTCA
CAAAGCGGAG CAATTTGTGC TGCACTAGTT GAAGATGCTA GTGCACAAGG AATTGGATTC
TCAGCTGTTG TTAGTCTTGG AAACAAAGCT GTAATGAGTG AAGTCGACGT TCTAAAAATT
CTTGCAAATC ACAAACAAAC AGAGGTTATT GTAATGTATC TTGAAGATAT GGGTGATGGC
CAAGAATTCC TCAAAGTTTG TAAAAATATT ACTAAAAAAC TCAAAAAACC TGTTCTAGTT
CTTAAATCTG GACGCAGTCC TGAAGGTGCA AAAGCCGCAA TGTCTCATAC TGGAGCCTTA
ATGGGTTCAG ATGAAATCTA TGATGCATTA CTGAAACAAT CTGGTGCAAT CCGAGTTGAT
ACTATGGAAG AACTATTTGA TTATGCAACA GCATTCTCAA AACAACCTTT ACCATCTAAT
GGTGATTTAG TAATTGTATC AAATGCTGGT GGACCTGCAA TCATTTCTAC AGATGCATGT
TCAAAGGCAA AAATCAAAAT GGCAGATATT ACAAGTATAA GAAAGAAAAT TGATGAAGTA
ATTCCTCCTT GGGGGAGTTC TAGAAATCCT GTTGATATTG TTGGTGATGC TGATTTTAAT
AGATTCCATA ATGTTTTGGA CCGTGTCTTA AAACATCCAA AAGTTGGTTC TGTTATCTCA
ATGTGTACAC CTTCTGGTAC GCTGAATTAT GATAAACTTG CAGAGGTTAT TGTTGAGATG
TCAAAAAAAT ACAAAAAAAC CATGCTTGCA AGTTTAATGG GATTAGATGA AGGAGTTACT
AATAGAGAAA TCTTAGCTGA CGGAAATGTT CCATATTATA CTTATGCAGA AGGTGCTATC
CGAACTCTTG CTGCTATGAT TAGATTCTCT GATTGGGTTA AATCTTCTCC TGGTAAAATT
ACCAAATTCA AAGTAAACAA AGCAAAGGCC AAAAAAATAT TTGATCAAGT TAAAAAAGAA
AAAAGACCAA ATCTCTTAGA AGAAGAAGGA CAAGAAGTTC TCAAAGCATA TGGTTTGCCA
CTTCCTAAAA GTACACTTGC TAAGAATGAA GCAGAAGCTG TAAAGGCTGC AAAAAAGATT
GGTTATCCAG TTGTAATGAA AATTGCATCT CCTCAAATTA TTCACAAATC TGATGCAGGT
GGTGTTAAAG TCAATTTAAC AAATGATGCT GAAGTAAAAG ATGCTTTCAA AACTATTGTA
AAGAATGCTA AAAAGTACAA CAAGAAAGCC GAGATAAAGG GTGTTTTGAT TGTCGAGATG
GTCAAAGGTG GAAAAGAATT GATCATAGGC TCCAAATTAG AACCTGGATT TGGTCCAGTA
ATTATGCTTG GTATGGGTGG AATATACGTA GAGGTTCTCA AGGATGTAAC ATTCAAACTT
GCTCCAGTAA CTGATAAGGA AGCTGATGAT ATGATTGCAT CAATTAAAAC TCAAAAACTA
CTACAAGGAG TTCGAGGTGA GAAACCATCT GATATTGTAA AACTCTCTGA GTGTATTCAG
AGATTATCTC AACTAGTTTC TGACTTTAAA GAGATCAAAG AATTGGACAT GAATCCTGTA
CTTGTCATGG AAAAAGGTAA GGGTTGCAGA ATTTTAGATG TCCGAATAGG TCTTTGA
 
Protein sequence
MTDSPILSPK SIAVIGASDK RGSVGATITS NIMNGFKGTV YPISPTRDTV FYKKAYKSVL 
DVPKSIDLAV IVIKNTLVTP VLEECGKKKI KGVIIITAGF KEVDEEGAKR EQQVIDIAKK
YNMQVVGPNC LGVMNLDSKT MMNSTFLKVT PKSGKIALVS QSGAICAALV EDASAQGIGF
SAVVSLGNKA VMSEVDVLKI LANHKQTEVI VMYLEDMGDG QEFLKVCKNI TKKLKKPVLV
LKSGRSPEGA KAAMSHTGAL MGSDEIYDAL LKQSGAIRVD TMEELFDYAT AFSKQPLPSN
GDLVIVSNAG GPAIISTDAC SKAKIKMADI TSIRKKIDEV IPPWGSSRNP VDIVGDADFN
RFHNVLDRVL KHPKVGSVIS MCTPSGTLNY DKLAEVIVEM SKKYKKTMLA SLMGLDEGVT
NREILADGNV PYYTYAEGAI RTLAAMIRFS DWVKSSPGKI TKFKVNKAKA KKIFDQVKKE
KRPNLLEEEG QEVLKAYGLP LPKSTLAKNE AEAVKAAKKI GYPVVMKIAS PQIIHKSDAG
GVKVNLTNDA EVKDAFKTIV KNAKKYNKKA EIKGVLIVEM VKGGKELIIG SKLEPGFGPV
IMLGMGGIYV EVLKDVTFKL APVTDKEADD MIASIKTQKL LQGVRGEKPS DIVKLSECIQ
RLSQLVSDFK EIKELDMNPV LVMEKGKGCR ILDVRIGL