| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0194 |
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| Symbol | |
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| ID | 5772997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 176568 |
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| End bp | 177590 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641315812 |
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| Product | glycosyltransferase family 28 protein |
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| Protein accession | YP_001581528 |
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| Protein GI | 161527702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
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| TIGRFAM ID | [TIGR00661] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.775118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTTCTTG TAAATTTTTT TTCTAGTCCA ATAGGATTAG GTCATGTAAC AAGAGATATT
GCAATCAAGA ATAATTTCCA AAATATTACA ACTAATTTTG TTACAGGTAG TGGTGCTGCT
AAAATTCTAA AGAAATTAGA AATTCAGGTT GATGATGTAT ATCATCCACC ATCATTCATT
GTTGAGAATG GTACATTGAA AAGTCCTGCA AAATGGCTTT GGAATTACTA TCAATACTAT
AAAGATTGTA AAAACATTTC ACGAAATATT TTAGAAAAAA ATAGATCTAA TATTGTGATT
AGTGATGAGG ATTTTGCTTC ACTAACAGTA GCTCAAGAAA TGAAAATTCC AACTATTTTG
GTTACTGATA TTTTAGAGAC ACATTTTACA AAAGGTCTAG CATCATTTAT CGAAAAAAAG
ATGAATAAAT CAATGCAAGA GATCATAAAA AAATGTGAAA TTGTCATATT GCCAGAAATA
GGTGATGCAC AAGACAACAT ACAAAGAGTA GGACCCATAG TACGACAAAC AGATCACACT
AGAGAACAAT TACGAGAAAA ATTTTCATTT GATAAAAAAA CAATTGTTAT TTCAATTGGT
GGAACTGATG CAGGATTGTT TTTAATTGAA AAAGCACTAG AGGCAATTAC AAAAATCAAT
CAAGATGTTA AAATTGTACT AGTTTCAGGT CCATCAGTTG AAAAAAAATT TGAGAATGTA
GAAAATTTGG GATTTGTAGA AAATTTGCAT GAAATAATTT TTGCAGCTGA TGTGTTAATT
TCACTTGCAG GAAAATCAAC AATTGATGAG GCTAATGCAT ATGGTACGCC CGCAATATTC
ATTCCAATTA AAGGTCATTT TGAACAAGAG GATAATGCGA AAGAACAAGG ATTTGTTTTT
GAAGATATCA AAAGACTTGA CAAGTTAATT CTATCAAAAT TAGAAGAAAA GAGAAATAAA
GTCAATACCG AAGGTGCAGT AAAAGCTGCA AAAATCATTC AAAGCTTAAT AGATAACTAT
TGA
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| Protein sequence | MVLVNFFSSP IGLGHVTRDI AIKNNFQNIT TNFVTGSGAA KILKKLEIQV DDVYHPPSFI
VENGTLKSPA KWLWNYYQYY KDCKNISRNI LEKNRSNIVI SDEDFASLTV AQEMKIPTIL
VTDILETHFT KGLASFIEKK MNKSMQEIIK KCEIVILPEI GDAQDNIQRV GPIVRQTDHT
REQLREKFSF DKKTIVISIG GTDAGLFLIE KALEAITKIN QDVKIVLVSG PSVEKKFENV
ENLGFVENLH EIIFAADVLI SLAGKSTIDE ANAYGTPAIF IPIKGHFEQE DNAKEQGFVF
EDIKRLDKLI LSKLEEKRNK VNTEGAVKAA KIIQSLIDNY
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