| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0185 |
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| Symbol | |
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| ID | 5774160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 168337 |
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| End bp | 169284 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641315802 |
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| Product | blue (type1) copper domain-containing protein |
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| Protein accession | YP_001581519 |
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| Protein GI | 161527693 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3794] Plastocyanin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.312922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAA ATCAATACTA TCTAACAACC CCTGCAAGAA CAGGAAAAAT GATGGCAATT
ATGCTAGGTA TTTGTATTGT AGGTGGAGCA ATCTTCTTTT CACTTTGGGA TTATTGGATT
TCAGAACCTG CCCCAGTTGT TGCAATGATG GGAGGTGATT CTACACCAAC TGCAGTTGCA
GTTCACACTG GTGCAACCAT TACATCTGAT CTTTCATTTA TCGAATCTTC TGACTTTATC
ACTTTAGCAT TTAATGCATT ACCTGGTGAA CCTGGTAACA ACCCAACAAT CAACATGGAA
GTTGGTGACA AAGTAATCTT TAACGTAGTA AATGATGGTG TATCATTCCA CTCCTTTGGT
GTTACAGCAG ACACTGAGGG CTTTGGAGGA ATTTTCCCAG GAAGTGAAGT TGCAAGTCCA
GCAAATCCTC TAAAATCAGG TGAAGGTGGA ACTTCAGAAT TTATCGCAGG TGAAGAAGGC
GTATTCTATT ACATTTGTAC AGTTCCTGGT CACAGAGAAC AAGGAATGGT TGGAAAAATC
ATTGTAGGTG ACGCCGAGGT TCCAGAAGAA GTTGTTGAAG CCGTACCAGA ACCAATGGCA
ACTGAACCAG CCGAAGAAAA GGCTCCTGTT TCAACTGAAC CAGTTGCATA TGATGGTCCA
ATATCCCTCC CAGAAGGCTC TGGAGTTCCT GGATGTCAGG AAACAAATGA ATGCTATATC
CCATATCATG TAACAGCACC AGCAGGAACC GAGATTGTTT GGTCAAATGA TGACACTGCT
GCTCATACTG TTACAAGCGG TTCTCCTGCA GATGGTCCTG ATGGAATATT TGACAGTAGT
ATACTTGCTG GAGGTTTAAC ATTCTCTGTA ACCCTTGATG AACCAGGTGA ATATCCTTAC
TATTGTATAG TTCATCCTTG GATGGTTGGC AACATCACAA TAGAATAG
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| Protein sequence | MTENQYYLTT PARTGKMMAI MLGICIVGGA IFFSLWDYWI SEPAPVVAMM GGDSTPTAVA
VHTGATITSD LSFIESSDFI TLAFNALPGE PGNNPTINME VGDKVIFNVV NDGVSFHSFG
VTADTEGFGG IFPGSEVASP ANPLKSGEGG TSEFIAGEEG VFYYICTVPG HREQGMVGKI
IVGDAEVPEE VVEAVPEPMA TEPAEEKAPV STEPVAYDGP ISLPEGSGVP GCQETNECYI
PYHVTAPAGT EIVWSNDDTA AHTVTSGSPA DGPDGIFDSS ILAGGLTFSV TLDEPGEYPY
YCIVHPWMVG NITIE
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