Gene Nmar_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0178 
Symbol 
ID5774211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp164030 
End bp164431 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content30% 
IMG OID641315795 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001581512 
Protein GI161527686 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.210091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA AAGATGAATT TCTAAAAACA CAAAAGATTT TGCGTTTAGC AACTATTGGA 
AAAAACAAAA CTCCACATAT TGTTCCTGTG TGGTACAGAT ATAGTGGAAA AAAATTCCAC
ATAGGAACAA ACACCAGAAC TCAAAAAGCA AAGAATCTAA AGAAAAACAA CAGAGTTTCT
TTTTGTGTTG ATACAGGAGT TAATGCACCT AACATATACG GTGTCATGGG ACAAGGAAAA
TCAAATCTAA TCACAGAAAA AAAGAAAGTA AAAACTATAG CAAAAAAAAT TCTTTTACGT
TATTTTAAGA CAATAGAAAA CAAATCAGCT AAAGAATTAC TAGAGGATAC TGATTGTATT
ATAGAAATTA TTCCTGAAAA GGTTTCTGTG TGGAGTTACT GA
 
Protein sequence
MNKKDEFLKT QKILRLATIG KNKTPHIVPV WYRYSGKKFH IGTNTRTQKA KNLKKNNRVS 
FCVDTGVNAP NIYGVMGQGK SNLITEKKKV KTIAKKILLR YFKTIENKSA KELLEDTDCI
IEIIPEKVSV WSY