| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0167 |
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| Symbol | |
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| ID | 5773016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 154844 |
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| End bp | 155815 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 641315783 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001581501 |
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| Protein GI | 161527675 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02128] bifunctional phosphoglucose/phosphomannose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000739814 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGTGAAG TATATGATAA ATGGCCAGAA CTTGCACGTA AAGCATTTTT TCAACCAACG
GAAAAAATAG ATTTCAAGGA CATTAATGAA ATAATTTTTT CTGGAATGGG TGGTTCAGGT
TCAATTGGAG ATGGGTTTTC ATCTATTTTT TCTAAAACTA ATCTAAATGT TTCAACAATC
AAAGGATTCC ATCTACCAGA ATCTATTAAT CCCAAAACTC TTGTAATTCC AATTAGTGTT
TCAGGAAATA CTATTGAAAC ACATACTGTT TTAAAACAAG CAAAAAAAAG AGGATGTAAA
ATAATTGCAT TTTCATCAGG AGGTAAAATT GAAAAATTCT GTAATAATAA TAAAATTGAA
TATAGACAAA TTCCTATAGT ACATTCTCCT AGAGCTTCGT TTGTTAGCTT TTTTTATTCA
ATTCTAAATA CTCTTGAACC AATGATTCCA TTAAAACAAA ATATTATCTT AAAATCAATT
AATGATTTAG AACAACTTTC AAAAAATATT GCATCACACA AATTAGATAA AAAAAATAAA
TCATTAGAAC TTGCAAAATG GATCAATAAC ATTCCAATAA TATATTATCC AAATGGATTC
AAAGCAGCTG CAATTAGATT CAAGAATTCA TTACAAGAAA ATGCAAAACT TCATGCCATG
TCTGAAGATA TTATAGAAAT GTCACATAAT GGAATAGTTT CTTGGGAAAA AACTAGTTCA
ATACAACCAA TATTGTTGGA AGGAAAAGAT GATTATATAA AAACTAAAAA ATTACAAAAA
ATTGTTAAAG AGTATTTTAA GAAAAACCAT ATTCAGTATA ATGTTATTTC CTCACCAACA
GGTTCTATTT TAACAAAATT AGTCTACTTG ATATACTTGT TAGACTATTC TTCAATCTAT
AAAGCAATAA TTGAAAAAAT AGATCCTTCA CCAGTAAAAT CTATAGAATT TTTGAAGAAG
AAAATTAATT AA
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| Protein sequence | MCEVYDKWPE LARKAFFQPT EKIDFKDINE IIFSGMGGSG SIGDGFSSIF SKTNLNVSTI
KGFHLPESIN PKTLVIPISV SGNTIETHTV LKQAKKRGCK IIAFSSGGKI EKFCNNNKIE
YRQIPIVHSP RASFVSFFYS ILNTLEPMIP LKQNIILKSI NDLEQLSKNI ASHKLDKKNK
SLELAKWINN IPIIYYPNGF KAAAIRFKNS LQENAKLHAM SEDIIEMSHN GIVSWEKTSS
IQPILLEGKD DYIKTKKLQK IVKEYFKKNH IQYNVISSPT GSILTKLVYL IYLLDYSSIY
KAIIEKIDPS PVKSIEFLKK KIN
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