| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0146 |
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| Symbol | |
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| ID | 5774387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 134267 |
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| End bp | 135256 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641315766 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001581484 |
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| Protein GI | 161527658 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000000342824 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAGAAA ATAAAACAAT TCTCATTACA GGAGGAACTG GTTCCTTAGG AACAGCATTA
ACAAAACGTC TTCTTAAGAG CAAAGTCGGT ACAATCAGAA TTTTTAGTAG AGATGAATGG
AAACAAACCA AAATGTTTGA AGAGTTAGAT GATAGCAGGC TACGATTTTT CATTGGAGAT
ATTAGAGATA AGGAAAGACT TTCAAGAGCT GTTGAAGGAG TAGATTATGT TTTTCATGCT
GCAGCATTAA AACAAGTTCC TATTGCAGAA TACAATCCAT TTGAAGCAAT CAAAACAAAT
GTTTATGGTA CTCAAAATTT AGTTGATGTA TGTTTAGATA ATAATGTAAA AAAAGTGGTT
GCCATTGGGA CAGATAAAGC AGCATCACCT GCAAACACAT ATGGAGCTAC CAAATTATTA
ATGGAAAAAA TAATTATTTC AGCAAATTTT TTCAAAGGAA TTCATAAGAC ATCATTTGTT
TGTGTCAGGT ACGGGAATGT TTTAGGTAGT AGAGGTTCAG TTTTACCTAG ATTTATTGAA
CAAATTTCCA ATAAAGGAGT AATAACTTTG ACCGATCCAA AGATGACAAG ATTTACAATT
ACCATGAATG GTGCAATTGA CTTGGTTCTA AGAGCATTAA AAAACGGGAA TGGTGGTGAG
CTTTTTGTTC CACGCCTTAA ATCATATACA TTAGAAGAAC TCAAAAATGC AATTATTGAG
TTATCAGGAA AAAAAGTTAA AATTAAAAAA ATTTCTTTAA GACCGGGTGA AAAATTTCAT
GAGACACTAA TTTCAGGAGA TGAAATTTCT CAAACATATG AATCAAAAGA AGATTACATA
ATATTTCAAC AATCAATTGA TAAAATTAGC TCGTTAAAAA AACTTAAGTA TAAAAAAACA
AAATTGAAAT CAGCTTATAT CTCTAACAAG AATAATTTTA TTTCAAAAAA TCAATTGAAA
AAAATGATTC GTGAAGAAGG GTATTTTTGA
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| Protein sequence | MLENKTILIT GGTGSLGTAL TKRLLKSKVG TIRIFSRDEW KQTKMFEELD DSRLRFFIGD
IRDKERLSRA VEGVDYVFHA AALKQVPIAE YNPFEAIKTN VYGTQNLVDV CLDNNVKKVV
AIGTDKAASP ANTYGATKLL MEKIIISANF FKGIHKTSFV CVRYGNVLGS RGSVLPRFIE
QISNKGVITL TDPKMTRFTI TMNGAIDLVL RALKNGNGGE LFVPRLKSYT LEELKNAIIE
LSGKKVKIKK ISLRPGEKFH ETLISGDEIS QTYESKEDYI IFQQSIDKIS SLKKLKYKKT
KLKSAYISNK NNFISKNQLK KMIREEGYF
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