Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0140 |
Symbol | |
ID | 5774448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 129568 |
End bp | 130626 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 641315760 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001581478 |
Protein GI | 161527652 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000000000672144 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGTCCAAAA AAGTTCAAAT CCTTGACACT ACATTACGAG ATGGCAGTTA TTCTGTGAAT TTTTCATTTA CTAGTTCTGA TACATCTATA ATCTGTTCTA AATTGGAAAA ATCTGGAATT AAATTAATTG AAGTTGGTCA TGGACTTGGG TTTAATGCTT CTAACTCTGG TTATGGAAAA TCTACACAAT CTGATGAAGA ATATATGATT GCTGCAAAAG AGTCTTTATC AAAATCAATG TATGGAATGT TTTGTATTCC TGGAATTGCT AAACTATCTG ATTTAGAACT TGCTAAAAAA CATGGTATGG GATTTATTCG AGTAGGTACC GATGTTACCA AAGTACATCA ATCTGAAAAA TTTATCAAAA AAGCAAAAAA TCTTGGATTT TTTGTGGCCT CAAATTTTAT GAAATCTTAT GTAATGCCAC CTGATAAATT TGCATCAATT GTTAAACAAT CTGAAGAATT TGGAACTGAT ATGGTGTATA TTGTGGATTC TGCTGGAGGT ATGTTTTCTT CAGATTTGTT AGAATATTAT AATTCAATAA GAAACGTATC TGAAATTCCA CTTGGTTTTC ATGGTCATGA TAATTTAGGT ATGGCAATTT CAAACAGTCT GTATGCTGCT GATTTAGGTA TGGAATACAT AGATTCTTCT CTTCAGGGAA TTGGAAGAAG TTCTGGAAAT GCTTGTACTG AAGTTTTAGT TATGGCATTG AAGAAAAAAG GATTCAAGAT AGATGTTGAT TTTCATAGTC TCTTTGAAGC AGGACAAGAA TGTGTTTACC CATTAATCAA TAATTCTAAT AAATTACCCC TTGATATTGT TTCAGGTTAT GCTGATTTTC ATTCAAGTTA TATGCATCAT ATAATGAAAT ATTCTTCCAA GTTTAAAGTT GATCCATTAT TATTGATTAT AGAATATTCT AAAATTAATA AAATTGATAT TGATGAAAAA AAATTAGAAC AAATTGCTAA AAAATTAAAG AGAAAACAGG ATATTTACAC TGCAAAATAC AGATTTAACA GATATGTCGG AAGAGAACAA GATAATTAA
|
Protein sequence | MSKKVQILDT TLRDGSYSVN FSFTSSDTSI ICSKLEKSGI KLIEVGHGLG FNASNSGYGK STQSDEEYMI AAKESLSKSM YGMFCIPGIA KLSDLELAKK HGMGFIRVGT DVTKVHQSEK FIKKAKNLGF FVASNFMKSY VMPPDKFASI VKQSEEFGTD MVYIVDSAGG MFSSDLLEYY NSIRNVSEIP LGFHGHDNLG MAISNSLYAA DLGMEYIDSS LQGIGRSSGN ACTEVLVMAL KKKGFKIDVD FHSLFEAGQE CVYPLINNSN KLPLDIVSGY ADFHSSYMHH IMKYSSKFKV DPLLLIIEYS KINKIDIDEK KLEQIAKKLK RKQDIYTAKY RFNRYVGREQ DN
|
| |