Gene Nmar_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0108 
Symbol 
ID5773850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp98896 
End bp99207 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content25% 
IMG OID641315728 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_001581446 
Protein GI161527620 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000262572 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCCG CGATAATCAT TTCAACTTAT CCTGATAAAA AATCAATCAC AAAAATCGCA 
AAAATATTTG TAAAAAATAA GACTGTTGCA TGTGTAAATA TATCAAAAAT AGACTCAATC
TATTCTTGGA ATAAAAAAAT AGAAAATACA TCTGAATATA TAGCTATTTT CAAAACTACA
TCAAAAAATA CAAAATTACT TAAAGAAAAA ATCAAAGAAA CTCATCCATA TAATGTTCCT
GAAATTGCTG AAATTGATGT AACTTCAATA AACAAATCCT ATCTTGATTG GTTGATAGAC
TCTACAAATT AA
 
Protein sequence
MKPAIIISTY PDKKSITKIA KIFVKNKTVA CVNISKIDSI YSWNKKIENT SEYIAIFKTT 
SKNTKLLKEK IKETHPYNVP EIAEIDVTSI NKSYLDWLID STN